Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2808 ATGGCCAGACGCAACGACAGACTTCCTCCACCGGAAAATCCAAACACCGATTACCGGTTAAAGCGGAGAAGACCTCATCGTTCGGGACCATCAGATGCTCACTTTAAACGGCGCCGGTTGGCGCCGAAGTCGGATACTTCGACCGGAACCCACAAATCTCACCGGTTGAACCGGTTTCAAGCCTTTAGTTCTTCGTCCCAAAATCGTAGAAAGAAGAGAAGAGTTGGAAAATCCGGCGGCAGCAGCAGCCGCGGAGCGTGTTCCCGAAGATGGATTTTTTCTTCTGCAGATTGTTCCAACTTCAATGATAAGGTTACTATAGTTTCATACAACATACTCGGTGTTGAAAATGCGTCAAAGCATCTGGATTTATATGCGAATACTCCACGTAGTTTCTTGGAGTGGGAGAGGCGGAAAAGGCTCATATTTGAAGAGATCAATACCTACAATGCAAGCGTGTTGTGTTTCCAGGAGGTTGATCATTTCAATGATCTGGATAATCTATTCCAAAACAATGGCTTCAAAGGTGTTTATAAGGCTCGCACAGGGGATGCGCATGATGGTTGTGCTTTATTCTGGAAAGACAAATTATTCACTCTTTTGCATCAAGAAGATATAGAGTTCCAAAGATTTGGTCTCCGTAACAATGTTGCTCAGCTTTGTGTTTTGGAGGCACGAAATGATAAACCAGAATCCGAAACATCTGGACTAACAACAGTGACATCATCTACCCAGAGAAAAAGATTTGTAATAGGAAATATACATGTGCTCTTCAACCCAAATCGTGGAGACATCAAACTTGGCCAGGTCAGACTTTTACTTGATAAAGCTTACAAGTTATCAGAAGAATGGGGTAGTATCCCTGTTATTATTGCTGGGGATTTAAATAGTCTTCCACAGAGTGCAATATATGAATTCCTGGCTTCTTCCAAGCTAGACATCCAATTGCATAATCGCAAAAATATGTCCGGACAACTTGAAATACAGTCCAATAGCAGAGTTTTCAGATCACAGATTGGTTATGAAGCTAGCATTTCAATATCCCGTTCAAGGCAATTTCTTCATGGATGGACCATGGAAGAACTAAACCTTGCAGCTGGCGCAATTGGAGTCACCAATCTTCAGCATCATCTAAACCTCCGCAGTGCTTACAGTGGTGTTCCTGGAAACCATGGTACAAGAGATGATATTGGGGAGCCCTTGGCAACATCATACCACTCCAAGTTCATGGGAACTGTTGATTATATTTGGCATTCGGAGGAACTCACTCCAGTAAGAGTTCTTGAAACCTTGCCCATTGATATTCTTAGAAGAACTGGAGGACTCCCCAGCGAGCAATGGGGAAGTGACCACCTTGCTCTTGTATGCGAATTAGCTTTTGCAAATAATGGGACGGTGTCATGA 1404 0.4345 MARRNDRLPPPENPNTDYRLKRRRPHRSGPSDAHFKRRRLAPKSDTSTGTHKSHRLNRFQAFSSSSQNRRKKRRVGKSGGSSSRGACSRRWIFSSADCSNFNDKVTIVSYNILGVENASKHLDLYANTPRSFLEWERRKRLIFEEINTYNASVLCFQEVDHFNDLDNLFQNNGFKGVYKARTGDAHDGCALFWKDKLFTLLHQEDIEFQRFGLRNNVAQLCVLEARNDKPESETSGLTTVTSSTQRKRFVIGNIHVLFNPNRGDIKLGQVRLLLDKAYKLSEEWGSIPVIIAGDLNSLPQSAIYEFLASSKLDIQLHNRKNMSGQLEIQSNSRVFRSQIGYEASISISRSRQFLHGWTMEELNLAAGAIGVTNLQHHLNLRSAYSGVPGNHGTRDDIGEPLATSYHSKFMGTVDYIWHSEELTPVRVLETLPIDILRRTGGLPSEQWGSDHLALVCELAFANNGTVS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2808 467 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 55 460 - -
Ahy15g2808 467 MobiDBLite consensus disorder prediction 34 52 - -
Ahy15g2808 467 MobiDBLite consensus disorder prediction 1 86 - -
Ahy15g2808 467 Pfam Endonuclease/Exonuclease/phosphatase family 108 451 IPR005135 GO:0003824
Ahy15g2808 467 Gene3D Endonuclease/exonuclease/phosphatase 82 466 IPR036691 -
Ahy15g2808 467 PANTHER PROTEIN ANGEL 55 460 - -
Ahy15g2808 467 SUPERFAMILY DNase I-like 103 459 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2808 Ahy-Chr15 145912249 145917972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2808 - - lang:109351372 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2808 15 145912249 145917972 Ahy15g2808 15 145912249 145917972 ECH
Ahy15g2808 15 145912249 145917972 Ahy5g2461 5 99192462 99197489 hybridization