Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2725 ATGGCTCACAATCCATCTGATTCTGATAATGAAATTACAACAACAAAGCGAAAGCTCTTTGAACATGATATACATCAAGTTCTTGGAGGAAGAGAAGTGGCAGATGTTTTGTTATGGAGGAACAAGAAAATATCAGCTGCAATTTTGATTGGAATGACAGTGATATGGTTTCTATTTGAGGTTGTTGAGTACAATTTGGTGCCTCTGCTTTGTCACATTTCCATCACAATTATGCTTGTTCTGTTCATATGGTCAACTATGGCACAAATTTTCAAATGGAATGCACCCAATATCCCAGATATTATTTTACAGGATTACTTGTTTGAGGATCTTGCTACAATCTTCCACAGAGGATTCAAACAGTTATTACCAATGCTTCATTATATTTCAAGTGGAATTGACCTTCCAAGATTTCTCCTGATCATTGTTAGTCTCTACATGTTGTCAGTGATTGGAACCTACCTCAGCTTTGTAAATCTGTTATACATTGGTTTTCTCTGCATGCTGACACTGCCAATTATGTATGAACGTTATGAGGAAGAAATCAACAACCTAGTTGGCAATGTCATAGTGGACCTTAGGAAAAAGTACAAACAGTTTGAGAAGAGATATCTCAGCAAAATTCCAAGAGGATCAGTAAAAGAAAAGAAAAGGATATAA 660 0.3591 MAHNPSDSDNEITTTKRKLFEHDIHQVLGGREVADVLLWRNKKISAAILIGMTVIWFLFEVVEYNLVPLLCHISITIMLVLFIWSTMAQIFKWNAPNIPDIILQDYLFEDLATIFHRGFKQLLPMLHYISSGIDLPRFLLIIVSLYMLSVIGTYLSFVNLLYIGFLCMLTLPIMYERYEEEINNLVGNVIVDLRKKYKQFEKRYLSKIPRGSVKEKKRI* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2725 219 PANTHER RETICULON 6 216 IPR045064 GO:0009617
Ahy15g2725 219 Pfam Reticulon 33 188 IPR003388 -
Ahy15g2725 219 ProSiteProfiles Reticulon domain profile. 33 218 IPR003388 -
Ahy15g2725 219 PANTHER RETICULON-LIKE PROTEIN B9 6 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2725 Ahy-Chr15 144098906 144100912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2725 - - gmx:100809028 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2725 15 144098906 144100912 Ahy15g2725 15 144098906 144100912 ECH
Ahy15g2725 15 144098906 144100912 Ahy5g2523 5 100487434 100489411 hybridization