Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2009 ATGGCCATGGCAGTGCCGGTTTCTGCTATTGGTTTTGAAGGCTACGAAAAGAGGTTGGAAATATGCTTTTCCCACCCTGGACTCTTTTCTGACCCTGAAGGAAAGGGTCTAAGGTCTCTCACCAAGTCCCAGTTGGATGAGATTCTTGCTCCAGCTGAGTGCACCATTGTTTCTTCGCTTTCAAGCAACGACGTTGACTCCTATGTTCTTTCTGAGTCAAGCCTCTTCGTTTATCCCTACAAGATTATCATTAAAACTTGTGGTACTACTAAGTTATTGCTTTCAATCCCACCCATATTGCGGTTGGCTGAGACCCTTTCACTTAATGTCAAATCTGTGAGGTATACCCGAGGAAGTTTCATTTTTCCTGGTGCCCAGTCCTTCCCACACCGCAGCTTCTCCGAAGAAGTTGCCATTCTGGATAGCCATTTTGGGAAGCTTGGTTCAGGCAGCATGGCTTACATTATGGGCGGTGGCATAGACAAACCACAGAAATGGCATGTTTACTCTGCTTCTGCAGAATCTGTGAGCCCATGCGACTCTGTCTACACACTTGAAATGTGCATGACTGGATTGGACAGAGAGAAAGCACTTGTTTTCTATAAGGAACCATCTGGTTCAGCAGCGCGGATGACTGCTAATTCCGGCATCAGAAAGATCCTTCCTGATTCTGATATATGCGACTTTGAATTTGAGCCTTGCGGTTATTCAATGAATTCTGTCGAAGGTGCTGCTGTTTCTACAATTCATGTTACTCCAGAAGATGGTTTCAGCTATGCAAGCTTTGAAACAGTGGGATATGATTTGAAAATGGTCAATCTGAACGATCTAGTTGAGAGTGTGTTGGCATGCTTCCAACCTACTGAGTTTTCGTTAGCGGTTCATGTTGACTGTTCAAGCAAGTCATTTGAGCAGAGCTGTTTGCTGGATGTTAAGGGATACTGTCGTGAAGAGAGGAGCCACGAGGGGATTGGAATGGGTGGTTCTGTTGTCTATCAGAAGTTCGTCAAGACTTCTGATTGTGGTTCACCTAGATCAACTCTGAAGTGCTGGAAAGATGAAGAGGAAGAAGAGTAG 1077 0.4503 MAMAVPVSAIGFEGYEKRLEICFSHPGLFSDPEGKGLRSLTKSQLDEILAPAECTIVSSLSSNDVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILRLAETLSLNVKSVRYTRGSFIFPGAQSFPHRSFSEEVAILDSHFGKLGSGSMAYIMGGGIDKPQKWHVYSASAESVSPCDSVYTLEMCMTGLDREKALVFYKEPSGSAARMTANSGIRKILPDSDICDFEFEPCGYSMNSVEGAAVSTIHVTPEDGFSYASFETVGYDLKMVNLNDLVESVLACFQPTEFSLAVHVDCSSKSFEQSCLLDVKGYCREERSHEGIGMGGSVVYQKFVKTSDCGSPRSTLKCWKDEEEEE* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2009 358 ProSitePatterns S-adenosylmethionine decarboxylase signature. 67 77 IPR018166 GO:0004014
Ahy15g2009 358 SUPERFAMILY S-adenosylmethionine decarboxylase 15 337 IPR016067 GO:0004014|GO:0008295
Ahy15g2009 358 PIRSF SAM_decarbox_euk 1 342 IPR001985 GO:0004014|GO:0006597|GO:0008295
Ahy15g2009 358 Pfam Adenosylmethionine decarboxylase 11 335 IPR001985 GO:0004014|GO:0006597|GO:0008295
Ahy15g2009 358 Gene3D - 73 338 - -
Ahy15g2009 358 TIGRFAM SAM_DCase: S-adenosylmethionine decarboxylase proenzyme 12 338 IPR001985 GO:0004014|GO:0006597|GO:0008295
Ahy15g2009 358 Gene3D - 1 72 - -
Ahy15g2009 358 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE 3 358 IPR001985 GO:0004014|GO:0006597|GO:0008295
Ahy15g2009 358 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 2 3 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2009 Ahy-Chr15 112423389 112426328 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2009 K01611 - gmx:547981 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2009 15 112423389 112426328 Ahy15g2009 15 112423389 112426328 ECH