Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1778 ATGTCCAGCTTCACTCACGCCACCACATTACTCCATGCCCACATCAAAACCAAGCAGAAAACAACCACTCTGGCCGCCGCCACCACCACCAACAACCAAGCACCATTTTATGCTGAACAAAAAGATAATAATAGCACCAACAGTAGTAGTAGAAGAAAAGTAATGTCAACATTTGTAGCAACTTCGATGGGAGTAGTTCTGGGCGGCACAACGACAATGACACCACAGGCGGCCGCTCAGAATTGGGGGACTCGTTCGTTCTTGAGAGAGCATTTCTTTGAGGCGGGGCTGTCTCCGGAGGACGCAGTGGCGAGGATAAAGCAAACGGCGGAGGGGCTACATGATATGAGGGAGATGCTGGAAACAATGTCATGGAGGTATGTGATGTTCTACATAAGGCTGAAGCAGGCTTATCTTGATCAAGATTTGAAGACTGCAATGTCCACTTTGCCCGACAACCGCCGCAATGATTACATCAAAATTGCCAATGAATTGGTAGATCACATGACCGATTTTGACAGGTATGTTCGGACACCAAAGGTATATGAATCTTACCTATACTACGAGAAGACCTTGAAATCAATAGATCAACTTGTCGCTATCTTAGCATAA 612 0.4608 MSSFTHATTLLHAHIKTKQKTTTLAAATTTNNQAPFYAEQKDNNSTNSSSRRKVMSTFVATSMGVVLGGTTTMTPQAAAQNWGTRSFLREHFFEAGLSPEDAVARIKQTAEGLHDMREMLETMSWRYVMFYIRLKQAYLDQDLKTAMSTLPDNRRNDYIKIANELVDHMTDFDRYVRTPKVYESYLYYEKTLKSIDQLVAILA* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1778 203 Gene3D - 64 202 IPR023222 -
Ahy15g1778 203 SUPERFAMILY Oxygen-evolving enhancer protein 3, 92 203 IPR023222 -
Ahy15g1778 203 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 2, CHLOROPLASTIC 1 203 - -
Ahy15g1778 203 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 37 203 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Ahy15g1778 203 ProSiteProfiles Twin arginine translocation (Tat) signal profile. 1 79 IPR006311 -
Ahy15g1778 203 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 203 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1778 Ahy-Chr15 59532573 59535800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1778 K08901 - gmx:100807480 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1778 15 59532573 59535800 Ahy15g1778 15 59532573 59535800 ECH