Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1623 ATGGAAGAAGAAGAACGAGTGTGGAGTTGGGGTGCTGGGACGGAGGGGCAGTTGGGTAATTGCAGCCTTGAAGACGAGGTCAGTCCTCAGCTCATTCGCCAACCCCCTCTTTCTGTCTCCAACGTCTCCTCCCTTGCGTGCGGCGCCGCCCACGTCATCGCCATCACCTCCAGTGGGAAGGTACTTTCATGGGGCAGGGGCAGTTCTGGACAACTAGGCCATGGGGAGTTTGTTAACAACTCCTTGTATCCTAAGCCTGTAACATCACTGGACCCTTACTTCATAACCAATGTCTCTGCTGGTTGGAGTCACTCCGCTTTTGTTTCAGATACCGGATGCTTGTTCACTTGCGGCGATGCTTCATTCGGTCAGCTTGGCCATGGCGATTACACATCACGTTGCTCTCCTGCCAAGGTATCATCCTTTGATAATCGCCGTGTTGCCAAGGTAGCATGTGGCATGCGCCATTCCCTCGTTTTGTTGGAAGATTGTTCATCAAATCAAGTTTATGGATTTGGGTCTGGGAAGCGCGGTCAATTGGGTGTCTCCAAAGATAGGGTCAAATCTATTAATCTTCCTCAAGTTGTTAGTGGATTTGAAGATGTTGAGACAGTCGACATTGCTGCAAATGGAGATCATAGTGCTGCAATATCTGTTGATGGAAATCTTTACATATGGGGAAGAGGATTCAAGGGCTATGAAGATGCTAATTCTCCTCGACGATTGAACTCTACCTTGAGTTTTACCAAAGTTGCTCTAGGATGGAACCATGCTTTAACTTTGACTGGTGAAGTCTATATGATTGGTGGCAACCATCTTGGAGTGCTTAGTAATCATTGGAGTACGAGCTCAGCAAAACAGTTACATGATTTAAGAGAAGCCAATATGGAGAAAGTCCCTGGCCTTGATGATACAAAGGTTGTTGATATTGCCGCTGGTGCCGAGCACTCCATTCTTGTCACAGAGAATGGAGAAATAAAGACATGGGGTTGGGGTGAGCATGGTCAACTTGGCCTGGGGGATCCTTGTGACAGGGCCCGTCCTGTTACAGTAAATCTTGGTTATGATATGGATGGAGTTTCCTCTATCAGAGTCTACTGTGGAAGTGGCTTTACCTTTGCTTTAACCAAGCCCTAG 1137 0.4758 MEEEERVWSWGAGTEGQLGNCSLEDEVSPQLIRQPPLSVSNVSSLACGAAHVIAITSSGKVLSWGRGSSGQLGHGEFVNNSLYPKPVTSLDPYFITNVSAGWSHSAFVSDTGCLFTCGDASFGQLGHGDYTSRCSPAKVSSFDNRRVAKVACGMRHSLVLLEDCSSNQVYGFGSGKRGQLGVSKDRVKSINLPQVVSGFEDVETVDIAANGDHSAAISVDGNLYIWGRGFKGYEDANSPRRLNSTLSFTKVALGWNHALTLTGEVYMIGGNHLGVLSNHWSTSSAKQLHDLREANMEKVPGLDDTKVVDIAAGAEHSILVTENGEIKTWGWGEHGQLGLGDPCDRARPVTVNLGYDMDGVSSIRVYCGSGFTFALTKP* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1623 378 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 98 108 IPR000408 -
Ahy15g1623 378 PRINTS Chromosome condensation regulator RCC1 signature 61 77 IPR000408 -
Ahy15g1623 378 PRINTS Chromosome condensation regulator RCC1 signature 169 183 IPR000408 -
Ahy15g1623 378 PRINTS Chromosome condensation regulator RCC1 signature 6 22 IPR000408 -
Ahy15g1623 378 PRINTS Chromosome condensation regulator RCC1 signature 319 340 IPR000408 -
Ahy15g1623 378 PRINTS Chromosome condensation regulator RCC1 signature 42 55 IPR000408 -
Ahy15g1623 378 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 324 378 IPR000408 -
Ahy15g1623 378 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 263 323 IPR000408 -
Ahy15g1623 378 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 310 320 IPR000408 -
Ahy15g1623 378 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 59 111 IPR000408 -
Ahy15g1623 378 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 5 58 IPR000408 -
Ahy15g1623 378 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 167 220 IPR000408 -
Ahy15g1623 378 SUPERFAMILY RCC1/BLIP-II 5 276 IPR009091 -
Ahy15g1623 378 Gene3D - 232 377 IPR009091 -
Ahy15g1623 378 Gene3D - 1 231 IPR009091 -
Ahy15g1623 378 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 112 163 IPR000408 -
Ahy15g1623 378 Pfam Regulator of chromosome condensation (RCC1) repeat 168 217 IPR000408 -
Ahy15g1623 378 Pfam Regulator of chromosome condensation (RCC1) repeat 6 55 IPR000408 -
Ahy15g1623 378 Pfam Regulator of chromosome condensation (RCC1) repeat 112 160 IPR000408 -
Ahy15g1623 378 Pfam Regulator of chromosome condensation (RCC1) repeat 324 375 IPR000408 -
Ahy15g1623 378 Pfam Regulator of chromosome condensation (RCC1) repeat 58 108 IPR000408 -
Ahy15g1623 378 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 221 264 IPR000408 -
Ahy15g1623 378 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 150 160 IPR000408 -
Ahy15g1623 378 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 7 372 - -
Ahy15g1623 378 PANTHER OS01G0777800 PROTEIN 7 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1623 Ahy-Chr15 34592211 34595855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1623 - - adu:107490763 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1623 15 34592211 34595855 Ahy15g1623 15 34592211 34595855 ECH