Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1543 ATGGCTCTGTCACGCATAGCATCATCAACTCATGCATCCAACCTCCTTAAACCCCTCTCCGCCGCCTTATCCATCCGCCGCGTTATCTCCTCCGACTCCACCGATCCCCTCACCATCGAAACCTCTCTTCCATTCATCTCCCATAAATGCGACGCGCCCCCACGCGCCGTCGACACCTCCGCCTCGGAGCTCTTCTCCTTCTTCCGGGACATGGCCACCATGCGCCGCATGGAGATCGCCGCCGACTCACTCTACAAGGCCAAGCTCATCCGCGGCTTCTGCCACCTTTACGACGGTCAGGAGGCTGTGGCCATCGGCATGGAGGCCGCCATCACCAAGAAGGACGCCATCATCACCGCCTACCGCGACCACTGCATCTTTATTGGCCGCGGAGGCACGCTCCTCGAGGTCTTCGGCGAGCTCATGGGCCGCATCTGCGGCGGCTCCAAGGGCAAGGGCGGCTCCATGCACTTCTACCGCAAGCAGACCAATTTTTTCGGTGGCCACGGCATCGTCGGAGCTCAGATTCCGCTTGGATGTGGGTTGGCGTTTGCTCAGAGGTACTCCAAGGAAGAGAATGTGACATTTACCTTGTATGGTGATGGTGCTGCCAACCAGGGCCAATTGTTTGAGGCACTTAATATGGCAGCGCTTTGGGACCTACCTGCGATCTTGGTCTGCGAGAATAACCATTATGGGATGGGAACAGCAGAGTGGAGAGCTGCTAAAAACCCTGCTTATTACAAGCGTGGAGATTATGTTCCTGGGTTGAAGGTTGATGGCATGGATGTTCTTGCTGTGAAACAAGCTTGCAAGTTTGCAAAGGAGCATGCTTTGAAAAATGGGCCCCTTATTCTTGAAATGGACACCTATAGATACCACGGGCACTCTATGTCTGATCCTGGAAGCACATACCGTACACGTGACGAGATTTCCGGTGTGAGACAGGAGCGTGATCCAATTGAGAGAGTAAGGAAGCTATTATTGGCTCATGACATTGCTTCTGAGAAGGAGCTAAAGGACATTGAGAAACAAGTCAGAAAAGATGTCGATGATGCCATCGCTAAAGCAAAGGAATGCCCAATGCCAGACCCATCTGAACTATTTACCAATGTATATGTTAAGGGTTTAGGAGTTGAGTCATTTGGTGCTGATAGGAAAGAAGTGAGAGCTACTTTGCCGTGA 1185 0.5266 MALSRIASSTHASNLLKPLSAALSIRRVISSDSTDPLTIETSLPFISHKCDAPPRAVDTSASELFSFFRDMATMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRDHCIFIGRGGTLLEVFGELMGRICGGSKGKGGSMHFYRKQTNFFGGHGIVGAQIPLGCGLAFAQRYSKEENVTFTLYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKNPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLAHDIASEKELKDIEKQVRKDVDDAIAKAKECPMPDPSELFTNVYVKGLGVESFGADRKEVRATLP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1543 394 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 10 394 - -
Ahy15g1543 394 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 10 394 - -
Ahy15g1543 394 CDD TPP_E1_PDC_ADC_BCADC 67 357 - -
Ahy15g1543 394 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 62 374 IPR017597 GO:0004739|GO:0006086|GO:0043231
Ahy15g1543 394 MobiDBLite consensus disorder prediction 297 316 - -
Ahy15g1543 394 Gene3D - 23 388 - -
Ahy15g1543 394 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 52 375 IPR029061 -
Ahy15g1543 394 Pfam Dehydrogenase E1 component 70 365 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1543 Ahy-Chr15 30679856 30684010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1543 1 394 Acyl Lipid Metabolism Gene Families AT1G24180 78.788 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1543 K00161 - fve:101298701 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1543 15 30679856 30684010 Ahy15g1543 15 30679856 30684010 ECH