Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1448 ATGCTATGCTCTCTAATCCAGCTCCGCCGCTACGCTACTAGCTCCTCTTCCCCACTCTCTCCCCTCCACAATCTCCGCCGTAAACGTTTCTTTTACTCCACCGTAACCGCCATGGTGCCCCACCCCAAGGACGAGGCGTACTTGAACGCCGCCATTCCGAAGCGTATCAAGATGTTCGAGTCCATCCAGGCCGAGCAGAAAACCCAGCGCCTCTCACTGTCGCCGGATCCAATCAAGGTCACACTTCCCGACGGCACGGTCAAGGACGCCTCCAAGTGGCAAACAACGCCGTTCGATGTGGCGAAAGAGATTTCTAAGAACCTCGCCAACAACGCACTCATCGCGAGGGTCAATGGTGTGCTATGGGACATGGCCAGGCCTCTCGAGCAGGATTGCGAACTCAGGATCTACAAGTTCGAAGACGACGAAGGCCGCGATACGTTCTGGCATTCTAGCGCTCACATTCTTGGCCAGTCGCTTGAGATGGAGTACGGATGCAAGCTCTGCATTGGGCCTTGTACTACAAGAGGAGAGGGTTTCTATTATGATGCGTTTTATGGTGACTTGGGATTGAATGATGATCATTTCAAGCAAATTGAGGCTGGGGCGTTGAAGGCAGCTGGGGAGAAACAACCTTTTGAGCGCATTGAAGTAACACGTGATCAAGCACTTGAGATGTTTTCAGATAATAAGTTCAAGGTTGAAATTATCAATGATTTGCCTGCTGATAAAACTATCACAGTATACAGATGTGGTCCACTAGTAGATCTGTGTCGTGGACCACATATACCCAATACTTCCTTTGTTAAGGCAATTGCCTGTTTGAAGGCTTCTTCAGCATATTGGAGGGGGAACAAAGATCGGGATACTTTACAAAGAGTTTATGGCATATCTTATCCTGATCAGAAGAGTTTAAAGGAATATTTGCTTAGGCTGGAGGAGGCTAAAAAGTATGATCACAGGATTTTGGGAGTGAAACAGGAGCTTATTTTTCATCATGAATGGAGCCCAGGAAGCTGGTTTTTCCTTCCACATGGTGCACTAGTATACAACAAATTGATAGATTTCATACGGAGTCAATACAGAGTCAGGCGATATCGAGAGGTCATATCTCCAAATGTATTTAACATGGATCTCTGGGAGCAATCTGGTCATGCTGCAAATTATAAAGAGAACATGTTTACCTTGGAGATTGAAAAGCACGAATTTGGGCTGAAACCAATGAATTGCCCAGGGCACTGCTTGGCCTTCAAGCAAAGAGTTCGCTCGTACAGGGAACTTCCTCTTCGCATGGCTGATTTTGGGGTCTTGCATAGAAATGAGGCTAGTGGTGCTTTGAGTGGATTGACGCGTGTTAGGAGATTTCAGCAGGATGATGCACATATTTTTTGCAGGGAGTCTCAGATAAAGGATGAAGTTAGAGAAGCCTTGAAGTTCATCGATTATGTCTATGAAATATTTGGTTTCACATACGATCTCAAGCTTTCAACGAGGCCTGAGAATTCCTTAGGAGAAAAAGCAACATGGGAGAAAGCTGAAAGTGCCCTTAAGGAAGCTCTGGATGAATTTGGGAAGCCTTGGCAGCTGAATGAAGGGGATGGTGCATTCTATGGACCAAAGATTGATATCAATGTATCTGATGCATTGAGTAGGAAATTTCAGTGTGCAACTTTGCAGCTTGATTTCCAACTACCTGATCGTTTTAAGTTGGAATACTCGGCTGAGGATGAAGCCAAGATTGAGAGGCCTGTCATGATACACAGGGCCATTCTAGGATCTGTTGAGCGCATGTTTGCCATACTTTTAGAGCACTACAAAGGTAAATGGCCCTTCTGGCTAAGTCCTCGTCAAGCAATTGTTTGCCCTGTGTCAGAGAAATCACAAGCTTATGCAGAGAAGGTGAATGATGAAATCTACAGCAAAGGGTTTCATGTTGATGTTGATTTAACAGATAGGAAGATTCAAAAGAAGGTGCGAGAGGCTCAGCTAGCACAGTACAACTACATCTTGGTTGTTGGAGAGCAGGAAGCTGAAACTGGACAGGTGAGCGTGCGGGTAAGAGATAAGGCGGACCTTACCACTATGAGTATTGAGGGCCTGCTCGAACGGTTCAGTGAAGATGCAAAAAATTTCCGTTGA 2139 0.4586 MLCSLIQLRRYATSSSSPLSPLHNLRRKRFFYSTVTAMVPHPKDEAYLNAAIPKRIKMFESIQAEQKTQRLSLSPDPIKVTLPDGTVKDASKWQTTPFDVAKEISKNLANNALIARVNGVLWDMARPLEQDCELRIYKFEDDEGRDTFWHSSAHILGQSLEMEYGCKLCIGPCTTRGEGFYYDAFYGDLGLNDDHFKQIEAGALKAAGEKQPFERIEVTRDQALEMFSDNKFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKAIACLKASSAYWRGNKDRDTLQRVYGISYPDQKSLKEYLLRLEEAKKYDHRILGVKQELIFHHEWSPGSWFFLPHGALVYNKLIDFIRSQYRVRRYREVISPNVFNMDLWEQSGHAANYKENMFTLEIEKHEFGLKPMNCPGHCLAFKQRVRSYRELPLRMADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKDEVREALKFIDYVYEIFGFTYDLKLSTRPENSLGEKATWEKAESALKEALDEFGKPWQLNEGDGAFYGPKIDINVSDALSRKFQCATLQLDFQLPDRFKLEYSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQAYAEKVNDEIYSKGFHVDVDLTDRKIQKKVREAQLAQYNYILVVGEQEAETGQVSVRVRDKADLTTMSIEGLLERFSEDAKNFR* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1448 712 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 246 295 IPR012947 GO:0004812|GO:0005524|GO:0043039
Ahy15g1448 712 Gene3D - 608 712 IPR036621 -
Ahy15g1448 712 ProSiteProfiles TGS domain profile. 76 138 IPR004095 -
Ahy15g1448 712 SUPERFAMILY ThrRS/AlaRS common domain 140 317 IPR018163 GO:0000166
Ahy15g1448 712 CDD ThrRS_anticodon 615 704 - -
Ahy15g1448 712 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 394 605 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Ahy15g1448 712 CDD ThrRS_core 319 615 IPR033728 -
Ahy15g1448 712 TIGRFAM thrS: threonine--tRNA ligase 149 706 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Ahy15g1448 712 Pfam Anticodon binding domain 617 706 IPR004154 -
Ahy15g1448 712 Gene3D - 141 298 - -
Ahy15g1448 712 Gene3D Bira Bifunctional Protein; Domain 2 299 607 IPR045864 -
Ahy15g1448 712 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 344 610 IPR006195 -
Ahy15g1448 712 Pfam TGS domain 78 138 IPR004095 -
Ahy15g1448 712 Hamap Threonine--tRNA ligase [thrS]. 143 710 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Ahy15g1448 712 CDD TGS_ThrRS 78 143 - -
Ahy15g1448 712 SMART tRNA_SAD_4 246 295 IPR012947 GO:0004812|GO:0005524|GO:0043039
Ahy15g1448 712 SUPERFAMILY Class II aaRS and biotin synthetases 319 602 IPR045864 -
Ahy15g1448 712 PANTHER THREONINE--TRNA LIGASE, CYTOPLASMIC 40 707 - -
Ahy15g1448 712 SUPERFAMILY Class II aaRS ABD-related 603 708 - -
Ahy15g1448 712 Gene3D - 76 136 IPR012675 -
Ahy15g1448 712 SUPERFAMILY TGS-like 78 138 IPR012676 -
Ahy15g1448 712 PANTHER THREONINE-TRNA LIGASE 40 707 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Ahy15g1448 712 PRINTS Threonyl-tRNA synthetase signature 583 596 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Ahy15g1448 712 PRINTS Threonyl-tRNA synthetase signature 539 567 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Ahy15g1448 712 PRINTS Threonyl-tRNA synthetase signature 438 461 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Ahy15g1448 712 PRINTS Threonyl-tRNA synthetase signature 405 433 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Ahy15g1448 712 PRINTS Threonyl-tRNA synthetase signature 610 622 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1448 Ahy-Chr15 26731997 26740043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1448 K01868 - gmx:100812652 1226.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1448 15 26731997 26740043 Ahy15g1448 15 26731997 26740043 ECH