Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1376 ATGACTATTATCACCTTCTCTATAATCTCAGTAGAAGCAAGGAAGAACAATCATCGCCAGAACATGATTAACAAAAGACTCCCCAAACGTCACACAAGAGGGAGAGCCACATCACCATCGCCATCTCCGTCGCCGTCTCCGCCAATGTCCACCAACACTTTTGACATTATGTCCTTTGGCGCAAAGGGCAATGGAATTTCTGATGATTCACAGGCACTTGTAGTTGCATGGAGAAGTGCATGCAAAGTTGGTGGTGCTACAGTTTTAGTTCCATCTAAACTCAAATTCCTTCTAAAACCCCTCACTTTACAAGGCCCTTGTATGCCAGATCTCACTCTTCAGATTGATGGAACTCTAGTGGCTCCAGAAGAGGCATCTTCATGGCCAAAATCAAGTTTATATCAGTGGATAAATTTCAAATGGCTACAAAACTTCACACTCAAAGGATCTGGAACTCTTGATGGCCAAGGCTCTAATTGGTGGACTACTTCCTCCTCTTCAGAACCTTATAATTATGAGACCCAGAGCTACTCTAAACACATTCCATACATGAAGCCAACTGCTGTGAGATTCTATTCTAGCAACCATATAACAGTTCGTGATATCAGAATCCTAAACAGTCCCTTATGCCATCTAAAATTTGATAACTCAAAGGGGATTCAAGTTACCAACATTACAATTTCTTCCCCACAGAATAGCCCTAACACTGATGGAATTCACTTGCAAAACACACACGATGTGCAAATTCAGCACTCTGATATTCAAACTGGAGATGACTGTGTATCCATCCAAACCGGTTGCTCTAAGGTTCATGTCCACCATATTATGTGTGGCCCAGGCCATGGTATAAGTTTAGGAGGATTAGGGAAAGACAAAAGCGTGGCATGTGTATCTGACATCATAGTTGAGGATATCTCAATGAAAAATACTCTATATGGAGCAAGGATCAAAACATGGCAGGGTGGGAATGGTATGGTTAAAAATGTGAGATTCTCAAGAATCCAAGTGTATGATGTTATGTTTCCAATAATGATAGACCAATACTATTGTGACAAGCATGCGTGTAAGAACCAAACAGAAGCAGTGGTGATTTCAGGTGTTAAGTTCAACCAAATAAGTGGGACTTATGGGGTGCAACCTATCCATCTAGCGTGCAGCAACTCCTTACCGTGCACCGACGTTGACTTAATTGACATTCAACTTAGACCTTCAGTTAAGTACCAAGGTTTATTACAGCAAGCTGTGTGTTGGAACTCTTATGGAACTTCTCAAGGACCTTTGCTACCTTCAAGCATTGATTATTGCTTAAGAAGTGGTGGGGGATCAATCAAGAGGATAGCAAGGTCACATGATACTTTATGTTACTAA 1368 0.4137 MTIITFSIISVEARKNNHRQNMINKRLPKRHTRGRATSPSPSPSPSPPMSTNTFDIMSFGAKGNGISDDSQALVVAWRSACKVGGATVLVPSKLKFLLKPLTLQGPCMPDLTLQIDGTLVAPEEASSWPKSSLYQWINFKWLQNFTLKGSGTLDGQGSNWWTTSSSSEPYNYETQSYSKHIPYMKPTAVRFYSSNHITVRDIRILNSPLCHLKFDNSKGIQVTNITISSPQNSPNTDGIHLQNTHDVQIQHSDIQTGDDCVSIQTGCSKVHVHHIMCGPGHGISLGGLGKDKSVACVSDIIVEDISMKNTLYGARIKTWQGGNGMVKNVRFSRIQVYDVMFPIMIDQYYCDKHACKNQTEAVVISGVKFNQISGTYGVQPIHLACSNSLPCTDVDLIDIQLRPSVKYQGLLQQAVCWNSYGTSQGPLLPSSIDYCLRSGGGSIKRIARSHDTLCY* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1376 455 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 18 443 - -
Ahy15g1376 455 MobiDBLite consensus disorder prediction 17 54 - -
Ahy15g1376 455 SMART pbh1 217 243 IPR006626 -
Ahy15g1376 455 SMART pbh1 297 318 IPR006626 -
Ahy15g1376 455 SMART pbh1 244 265 IPR006626 -
Ahy15g1376 455 SMART pbh1 326 347 IPR006626 -
Ahy15g1376 455 SMART pbh1 267 287 IPR006626 -
Ahy15g1376 455 Pfam Glycosyl hydrolases family 28 86 404 IPR000743 GO:0004650|GO:0005975
Ahy15g1376 455 Gene3D - 38 434 IPR012334 -
Ahy15g1376 455 PANTHER - 18 443 - -
Ahy15g1376 455 SUPERFAMILY Pectin lyase-like 43 432 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1376 Ahy-Chr15 23535349 23538843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1376 5 454 Glycoside Hydrolase AT3G26610 61.874 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1376 K01213 - gmx:100803027 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1376 15 23535349 23538843 Ahy15g1376 15 23535349 23538843 ECH