Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1329 ATGGCTTCCTCCTCTTCTTCTCGATCGGATCAGGATCGTCCAGGTTTAGGCGTAGGGTTATGTGAAGGAGAAGAAGAGTACGGATCAGAATCGGGTTGGGTGGAAGCTCGAAGTTCATGCGATCATCTGTGCTCCCTCTCCCCTGATCTCAGCCATATTCCAGCCCCTCAGAATACTCCCTGCTACGAGTGCCAACACCCGTCTGAAAACTGGTTGTGTCTATCGTGTAAGGAGGTGCTGTGCAGCCGTTTTGTGAACAAGCACATGCTGTCTCACTCGCGGCGCACCAACCACTGTGTGGCACTCAGCTTCAGTGATCTATCAGTCTGGTGTTTCTCCTGTGACGCTTACTTGGATGCACAACTCATCCCACAACTACGCCCCGTTTATCAACTTGCCTACATCTTGAAATTTGGCCAACCTCCGCCACTTCCTCAACACAATTAA 447 0.5101 MASSSSSRSDQDRPGLGVGLCEGEEEYGSESGWVEARSSCDHLCSLSPDLSHIPAPQNTPCYECQHPSENWLCLSCKEVLCSRFVNKHMLSHSRRTNHCVALSFSDLSVWCFSCDAYLDAQLIPQLRPVYQLAYILKFGQPPPLPQHN* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1329 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 140 IPR013083 -
Ahy15g1329 148 ProSiteProfiles Zinc finger UBP-type profile. 38 139 IPR001607 GO:0008270
Ahy15g1329 148 SMART Zf_UBP_1 60 109 IPR001607 GO:0008270
Ahy15g1329 148 SUPERFAMILY RING/U-box 38 131 - -
Ahy15g1329 148 Pfam Zn-finger in ubiquitin-hydrolases and other protein 61 119 IPR001607 GO:0008270
Ahy15g1329 148 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 2 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1329 Ahy-Chr15 21926179 21927418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1329 - - var:108319921 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1329 15 21926179 21927418 Ahy15g1329 15 21926179 21927418 ECH