Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1327 ATGGCGACGGCGACGGCGACGGAGGGAACCGAAACCAACGACGACGGTGCTCGTCCATGGCAATCCTACCACACTGTTTATACAACTGCCAAAGCAGGAATGGATGGTGTGGACAAGGAGAAAGTACAAAGGACAGTGTATGAAATGAGCAAAGGATCTAAGTATTTTCAGAACGAGGAACGCAAGGACGCTTTTATTACCCAGAAGATCGACAAAATCCGAACTCAATGTGATAAGCTTACCCAAGCAGACCTATCCCATTTTCAGAAGGTAGCTGACCGAAGAATACTTGAGCTAGAAGCTTTGCGGGATCTTTCAAGGATTTGGTTACATGTAGATATGGATGCTTTCTATGCAGCAGTTGAGACTTTAAGTAACCCTACATTAAAGGGCAAGCCAATGGCTGTTGGTAGCATGTCTATGATATCCACTGCCAATTATGAGGCTAGGAAATTTGGGGTTCGTGCTGCTATGCCTGGGTTCATTGCACGTAAACTTTGTCCAGAATTAATATTTGTCCCCACAGATTTCAAGAAGTATACCCATTACAGTGATTTGACCAGAACAGTTTTTCGGAGGTATGATCCCAATTTTATGGCTGCTAGCCTTGATGAAGCATACCTTGATATAACTGAAGTATGCAAAAGAAGGAACATCAAAAGTGAAGAAATTGCGGAAGAACTCCGCACTAGTGTTTATGAAGAGACCGGTCTCACATGTAGTGCAGGAGTGGCACCAAATCGCCTACTTGCCAAGGTTTGCTCAGATATTAACAAGCCAAATGGACAGTATGTCTTACCAAATGATCGTATGGCTGTTATGACCTTCATATCCTCCCTTCCTATCAGAAAGATTGGGGGCATTGGTAAGGTCACCGAACATATTCTGAAGGCTGTATTTGGAATTAACACGTGTGAACAGATGCTGGAGAAGGCTAGCTACCTCTGTGCTCTTTTCTCTCAGTCAACAGCAGATTTCTTTTTCTCTGTGGGTTTAGGTCTTGGGAAGACAGATTCTCCTGAAGTCAGATTTCGGAAGAGCATTAGTAACGAAAGAACATTTTCTGCCACCGAAGATGAAGTTCTGTTGTATAAAAAATTAGCGGAGCTTGCTGAAATGCTGTCCACAGACATGCAAAAAGAGGGTCTCTGTGGGCGAACATTGACTCTTAAACTGAAAACTTCTTCCTTCGAGGTTCGGACTAGAGCCATGACTTTACGAAAGTACATAAGCTCGAGGGAGGATATCTTGAAGCATGCTTCGGAGCTTCTAAAAGCAGAACTTCCTCTTTCAGTAAGATTGATAGGCCTTAGGATGTCACATTTTGATGGAGACAAGTATGGTGGCTCAACATCTAATCCGAAACAAAAGACTATCACCGACTTCATTACTTCTGTAGATGCCGATAGGAACCGTTTTTTGCCAGATGTTGCAGATCATGATTTTGTCAGCCATACAGAGACTGATGTTTCCATTGGCAGTTGCCAAAGAAGCAGAGATCCTGTTGATGGGAATCATTCATCTGATGTAAACTGCCAAAGTGGCACTGGCTGGAGTTCAGAGGAGATACAAACATCTGGCAACAATGCTTCATGTTCTAACTATGGCCAAGTTAAAGAAGCGGTGGAATCAACTTTTCCAATTCAGGGACAGTTTGAAGACACTAGTACACTAAATTTGTCTAATCTCCTGGAGGATGAGCGACTTAATTCTTGCGAGGATAAGACAATGTTGTGGTTGAATGACTACAAATGTTCACTTTGTGGAATAGAACTGCCTCCAAGTTTTGTTGAGGACAGATTAGAGCACTCTGATTTTCATCTTGCCGAAAAGCTTCAAAAGGAAGAATCTCGGATTCACCAAAGAACATCTGTTTCAGGTCAAAGCTGGGATCAGAAGAACAGAATCACTAGAGAAAGCATATCTAAGAAGCAAAAATTGTCTCAGAAAGAAGGCAGTTACAGACCCATTGATTATTTCTTTTTGTTAAAGAGCAATAAAAACCGTCCCAGTTAG 2016 0.4236 MATATATEGTETNDDGARPWQSYHTVYTTAKAGMDGVDKEKVQRTVYEMSKGSKYFQNEERKDAFITQKIDKIRTQCDKLTQADLSHFQKVADRRILELEALRDLSRIWLHVDMDAFYAAVETLSNPTLKGKPMAVGSMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTHYSDLTRTVFRRYDPNFMAASLDEAYLDITEVCKRRNIKSEEIAEELRTSVYEETGLTCSAGVAPNRLLAKVCSDINKPNGQYVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILKAVFGINTCEQMLEKASYLCALFSQSTADFFFSVGLGLGKTDSPEVRFRKSISNERTFSATEDEVLLYKKLAELAEMLSTDMQKEGLCGRTLTLKLKTSSFEVRTRAMTLRKYISSREDILKHASELLKAELPLSVRLIGLRMSHFDGDKYGGSTSNPKQKTITDFITSVDADRNRFLPDVADHDFVSHTETDVSIGSCQRSRDPVDGNHSSDVNCQSGTGWSSEEIQTSGNNASCSNYGQVKEAVESTFPIQGQFEDTSTLNLSNLLEDERLNSCEDKTMLWLNDYKCSLCGIELPPSFVEDRLEHSDFHLAEKLQKEESRIHQRTSVSGQSWDQKNRITRESISKKQKLSQKEGSYRPIDYFFLLKSNKNRPS* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1327 671 Hamap DNA polymerase IV [dinB]. 106 459 IPR022880 GO:0003887
Ahy15g1327 671 Gene3D - 27 113 - -
Ahy15g1327 671 ProSiteProfiles UmuC domain profile. 109 289 IPR001126 GO:0006281
Ahy15g1327 671 Gene3D - 343 447 IPR036775 GO:0003684|GO:0006281
Ahy15g1327 671 Pfam Ubiquitin-Binding Zinc Finger 582 615 IPR041298 -
Ahy15g1327 671 PIRSF DNA_pol_eta 451 665 - -
Ahy15g1327 671 PIRSF DNA_pol_eta 102 223 - -
Ahy15g1327 671 PIRSF DNA_pol_eta 14 90 - -
Ahy15g1327 671 PIRSF DNA_pol_eta 217 433 - -
Ahy15g1327 671 SUPERFAMILY DNA/RNA polymerases 83 337 IPR043502 -
Ahy15g1327 671 Pfam impB/mucB/samB family C-terminal domain 345 445 IPR017961 GO:0003684|GO:0006281
Ahy15g1327 671 Gene3D - 114 264 IPR043128 -
Ahy15g1327 671 CDD PolY_Pol_IV_kappa 110 442 IPR022880 GO:0003887
Ahy15g1327 671 MobiDBLite consensus disorder prediction 493 520 - -
Ahy15g1327 671 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 343 440 IPR036775 GO:0003684|GO:0006281
Ahy15g1327 671 PANTHER DNA POLYMERASE KAPPA 13 643 - -
Ahy15g1327 671 Pfam IMS family HHH motif 272 302 IPR024728 -
Ahy15g1327 671 Gene3D - 265 338 - -
Ahy15g1327 671 PANTHER DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER 13 643 - -
Ahy15g1327 671 Pfam impB/mucB/samB family 112 256 IPR001126 GO:0006281
Ahy15g1327 671 Gene3D - 126 174 - -
Ahy15g1327 671 ProSiteProfiles Zinc finger UBZ3-type profile. 578 615 IPR041298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1327 Ahy-Chr15 21887856 21892267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1327 K03511 - gmx:100816973 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1327 15 21887856 21892267 Ahy15g1327 15 21887856 21892267 ECH