Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1034 ATGAGGCAGGTGAAGGCGCTTCAGCTGTTTCATGATTTGGTGAACAAGAATGAACCAGCTCGGTTGCTTGGTTTGGATGTCGGTGATAAATACGTTGGTCTTGCTCTTTCCGACTTCCAGAACAAGATTGCTTCGCCCTTTAGTGTTCTGGTCAGGAAGAAATCAAATATTGATTTAATGGCTTCCGATTTCGAGACTCTAATCTCTAAATATTCATTGAAGGGCTTTGTTGTTGGCCTCCCTTTCAGCTGTCACCGTGTTTCTACTGATGCTGGACAAGTGAAGGTCTTCATTGATGCCCTTTCTAGAACTAAAAAACTTCAAGGTCTGAAATATACTTATTGGAACGAGTCTTTCACGTCAAAGAATGTTGAATTGCTCTTAAGGCCTTTGAACTTGAATAATGCAGTTCATTCCAAGACTATGCTCGACAAATTTGCTGCTGTAGGGATACTCCAGGGGTACCTGGATTATGTTAACAGAAAAATGAAGTTAATTGAAACAGAGCATGAGCCAGATATCACATGTAGAAAACTGTTGTTGTAA 546 0.4048 MRQVKALQLFHDLVNKNEPARLLGLDVGDKYVGLALSDFQNKIASPFSVLVRKKSNIDLMASDFETLISKYSLKGFVVGLPFSCHRVSTDAGQVKVFIDALSRTKKLQGLKYTYWNESFTSKNVELLLRPLNLNNAVHSKTMLDKFAAVGILQGYLDYVNRKMKLIETEHEPDITCRKLLL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1034 181 SUPERFAMILY Ribonuclease H-like 21 160 IPR012337 -
Ahy15g1034 181 Pfam Holliday junction resolvase 21 157 IPR005227 GO:0006364
Ahy15g1034 181 Gene3D - 19 168 IPR037027 GO:0006139
Ahy15g1034 181 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 164 - -
Ahy15g1034 181 Hamap Putative pre-16S rRNA nuclease [yqgF]. 20 160 IPR005227 GO:0006364
Ahy15g1034 181 SMART rnase_8s 20 124 IPR006641 GO:0006139
Ahy15g1034 181 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 164 IPR005227 GO:0006364
Ahy15g1034 181 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 23 157 IPR005227 GO:0006364
Ahy15g1034 181 CDD YqgF 22 157 IPR005227 GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1034 Ahy-Chr15 15772988 15776068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1034 - - aip:107643075 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1034 15 15772988 15776068 Ahy15g1034 15 15772988 15776068 ECH