Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0910 ATGGATGATAATCTCTTCAATGACCAAGTGGTGCCATCTGGTCGCATAACAGGAATAAAGTTTGGCCTTTTAACTGAGGAAGATATAGAGAATGCCTCTACTTTGGAAATACAAGCAGCCGGGCAGGTTAACTGTTCTGATTTGGGACTTCCAAACCCAACTCATGAGTGCACCACTTGTGGTTCTAAAGATAGAAATTTCTGTGAAGGCCATTATGGGGTAATTAAATTTAACATTACCATACCCCATCCTTATTTCCTATCGGAGATTGCACAACTTTTGAACAAAATCTGCCCTGCTTGTAAATCTATTCGAGAAGAATTACGGAGCAAGGGTGCTCAATTACTCTTTGGAACCAAACGGTCTAATGGTTGTAAATATTGTTCTGGAAATAGTTATCCAAAAATGAAATTCAGAGTTTCGTCCAATGATCTCTTCCGAAGAACTGCGATTATTGTTGAAATAAATGAGAGGTCTTTAAACTCAAAGAAACATTTGGGACGAAGAGTACCTGAACATTTTTGGGATTTCATCCCCTCAGATCCTCAGCAAGAAGAAAGTTGCATAAAACCAAACAGAAGGGCTTTATCCCCTTATCAGGTTCTTTGTTTGCTGAGCGATGTTGATCAAGACTTTGTTCAAAAATTTGTTCCACAGACGGAGTTACTTGGTCTTAATTGCTTCCCGGTGACGCCAAATTGTCATCGCGTGACAGAAGTCATGCATGCATTTTCTAATGCAAACCGATTGAGTTTTGACAACAGGACCAGAGCTTGTAAGAAATTGGTTGATTTCCGGGGTACAGCTACTGAGTTAATTTCTCGTGTTTTGGATTGCCTGAGGATCTCTAAGCTACATCCTGATAAAACACCAGCAAATAGTTTTGCTGATATCCAGCAAAAGAAAAATGCTGAAAATGCGTGCAATTCATCTGGTTTGAGATGGATGAAAGATGTGGTTCTTGGAAAACGTAATGATAGTTCATTCCGTACGGTAGTAGTTGGTGATCCAGACCTTGAGCCTGGTGAAATTGGTATACCTTGTCAAATCGCTGAAAGTCTGCAGGTTTCCGAGTATGTGAACAAGCATAATTTGGAAAAAGTGCTTTATTGTGGCGAGTTACGCATGATAGAGAAGGGAAACATAAAGGTCCGCAGAAAAGGTAGTCCTATTGTCCTGTACAAAAAAGAAGAGCTTCAAATAGGAGACTTGTTTTATCGGCCACTTGGTGATGGTGATAAAGTATTGATAAATAGGCCACCTTCCATACATCAACACTCAATGATTGCTCTCTCGGTTAAAGTCCTACCAATATCTTCTGCGGTGTCTATCAACCCACTTTGTTGTTCCCCACTCCGTGGGGATTTTGACGGTGATTGTCTTCATGGGTATATTCCACATTCAGTTGCTGCAAGAGTTGAGCTAAGTGAGCTGGTTTCTTTGGAGAAGCAATTGATAAATGGGCAGAGTGGTAAAAATCTGCTTTCACTCTCTCAGGATAGCTTGACGGCTGCCCATTTGCTGATGGAAGATGGGGTCCTTTTGAATGTTTACCAAATGCAGCAGCTTCAGATGTTTTGTGCTCATAATTTAACGCCACCTGCTATTGTTAAAGCTCCTTCCAGTAATACCTCATTTTGGACTGGCAAGCAATTATTCAGCATGCTGTTGCCTTCTAATCTTGACTATTCTTTTCCTTCAAATGGTGTTTCTATCAGAAATGGCGAGCTTATATCTTCTTCAGAGGCTTCTGGTTGGTTACGTGATTCTGACTGTAATCTTTTCCAGAGTCTTGTTGAACAATGTCAAGGGGACACTCTAGACTTTTTATATGCTGCACAGAAAGTTCTTTGTGAGTGGTTATCTATGACAGGTTTCACAGTTTCACTTGCTGACCTGTACCTTGCTTCTGACTCCTACGCACGGAAAAATATGATGGAGGAAATCTCCTTTGGCTTACAAGAAGCAGAACATTCGTGTAACTTCAAACAGTTGTTGGTAGATTCCTGTTGTGATTTTCTTGCAGGTAATGTTAAAGGAAATGAAAAGACTATGATTGATGTGGTTCGTATGAACTATGAAAGGCAAATATCAGCTGCTCTCAGTCAAGAGTCGGTTGATGCTTTTAGACAAGTTTTTCGTAATATTCAAGGTCTAGCTGACAGATATGGACATAAGGACAATTCATTCCTTGCTATGATCAAGGCTGGAAGCAAGGGTAATTTGCTGAAACTAGTGCAACATTCCATGTGCCTTGGCCTACAACATTCTTTGGTACGTTTATCATTCAGAATTCCCCATCAACTCTCATGTGCTGCTTGGAATAGTGAAAAGGGGCTTGATTCTGTCCAAAAGTTTTCTAGTACTCCTAAATCTGTTCAGTCTTATATCCCATATGCTGTGGTTGAAGGATCGTTCCTGTCTGGGTTGAATCCACTTGAATGTTTTGTTCATTCGGTCACAAATCGTGATAGCTCTTTCAGTGACAATGCTGACCTCCCTGGAACATTATCTCGTAGACTAATGTTCTTCATGCGGGATATTTATGGCGCATATGATGGAACGATTAGGAATTTGTACGGTAATCAGATTGTACAGTTTTATTATGATACTGATGAGGATTCGCCTATGGGTAGCTGCTCCCAAGAGACTACTATAGGTGGTGAACCAGTTGGAGCGCTTGCTGCTTGTGCGATTTCTGAAGCTGCATACAGTGCTTTGGGTCAACCAATAAGTCTTCTTGAAACATCACCTCTGTTGAATTTAAAGAGTGTTCTGGAGTGTGGTTCCAAGAAAAAAAGTGGTGACCAGACTGTCTCTTTATTTTTGTCTGCGAAATTTCGTGACCGGAGATATGGGTTTGAGTATGCAGCATTTGATGTTAAGAATTATTTGGAAAGAATAATGTTCTCAGATATTGTTTCTACTGTCATGATAATTTACACTTCACAGTCTAGAAACCAAGAAAAGTACAGCCCTTGGGTTTGCCATTTTCATCTAGACAAGGAAATTGTTCGCAGAAGAAACCTGAAATTGTGTTCTATCATTAACTCTCTTAAGAAGAGATGTGGGATTCTAAGGAAAGAATCCAAAGTATGTTTTGCCAGCATGGAAATATCACTCAACAGGAAGTGTTCAGCTGCATACATGTCTCAGGAAGGAAAAATTACTTCTACAGATAAGGGAATGGAGGGTGATGATTGCATCACTGTCACCCTTGTTGAATACTTAAACAATTCCATACCACTTGATGATGTTCGGGACTTTATGCTACCTTCCCTTCTTGGAACTACTGTAAAAGGATTTCCGGAGATCACGAAGGTTGATATTCTGTGGAATAGTCTTCCGAAATCAGCAAATTCCAGAATTGGCTGTTCTGGGGAACTTTACTTGAGGATTACTATGTCAAGTGATAATAGCAGTGGAAGATTCTGGGGTGTTCTTATAAATCATTGTCTACCGATAATGCATATGATTGATTGGACAAGAAGTCTCCCAGATAACATAAATCATTTCTGCTCAGCCTATGGAATTGATGCAGGATGGAAATATTTTCTCCAGAATTTGGCATCTGCAACAACAGATACTGGCAAGACAGTCCTTCACAAGCATTTGCGTCTTGTTGCTGATAGCTTGTCAGTTAGTGGAGAGTTTGTAGGGTTAAATGGAAAGGGCATGGCACGACAGAGACAACATGCATCTGTTTCATCTCCCTTTGTACAAGCATGCTTTTCTAACCCTGGTAGTTGCTTTATAAAATCTGCTAAGGCTGGAGTCAAAGATGATTTGCAAGGCATCCTCGACGCATTGGCATGGGGAAACTGTCCACCCTTAGGGACAAGTGGACAATTTGAGATTATATATTCTCCGAAGGGACAAGAGCTTGCTAAATCTGGAGATGTTTATAACCTGCTAAAGGCCAACTTTGACCAGCAGAGTGAAAAGAGCAGTCTCCCTACTGATTACAAATATTCACCTGAGAAATGGAGTTCTAATGTTCGGCCCAAAAATGGTGGGTTTGGCTTCAAAGTGCACAAACAGTTGAAAAGCCTTATTAGAAATTTTGTGACTGTGAACGATATTTACAAACTGACTTCTGCATCAAGGAACATACTGAACAAGTATTCAATTGATGAGCAACTGAATGAGAAGGACCTATTTACCATGCTGAAGGTTCTGCATTTTCATCCGCATAGAGATGAAAAGTATGGCTCTGGACCACAGCACATCAAGGTTGGATGGCACCCTGAACATAAGACTACACGCTGCTTTTTCATAGAACGAACTGATGGGACTGTGGAGGATTTTTCATACCGGAAATGCATTCTTGGTGCTCTTGAGATTGTTGCCCCAGATAAGGCAAAGACCCAGAAGAAAAAATGGAAGAAAGATGAATAA 4398 0.4047 MDDNLFNDQVVPSGRITGIKFGLLTEEDIENASTLEIQAAGQVNCSDLGLPNPTHECTTCGSKDRNFCEGHYGVIKFNITIPHPYFLSEIAQLLNKICPACKSIREELRSKGAQLLFGTKRSNGCKYCSGNSYPKMKFRVSSNDLFRRTAIIVEINERSLNSKKHLGRRVPEHFWDFIPSDPQQEESCIKPNRRALSPYQVLCLLSDVDQDFVQKFVPQTELLGLNCFPVTPNCHRVTEVMHAFSNANRLSFDNRTRACKKLVDFRGTATELISRVLDCLRISKLHPDKTPANSFADIQQKKNAENACNSSGLRWMKDVVLGKRNDSSFRTVVVGDPDLEPGEIGIPCQIAESLQVSEYVNKHNLEKVLYCGELRMIEKGNIKVRRKGSPIVLYKKEELQIGDLFYRPLGDGDKVLINRPPSIHQHSMIALSVKVLPISSAVSINPLCCSPLRGDFDGDCLHGYIPHSVAARVELSELVSLEKQLINGQSGKNLLSLSQDSLTAAHLLMEDGVLLNVYQMQQLQMFCAHNLTPPAIVKAPSSNTSFWTGKQLFSMLLPSNLDYSFPSNGVSIRNGELISSSEASGWLRDSDCNLFQSLVEQCQGDTLDFLYAAQKVLCEWLSMTGFTVSLADLYLASDSYARKNMMEEISFGLQEAEHSCNFKQLLVDSCCDFLAGNVKGNEKTMIDVVRMNYERQISAALSQESVDAFRQVFRNIQGLADRYGHKDNSFLAMIKAGSKGNLLKLVQHSMCLGLQHSLVRLSFRIPHQLSCAAWNSEKGLDSVQKFSSTPKSVQSYIPYAVVEGSFLSGLNPLECFVHSVTNRDSSFSDNADLPGTLSRRLMFFMRDIYGAYDGTIRNLYGNQIVQFYYDTDEDSPMGSCSQETTIGGEPVGALAACAISEAAYSALGQPISLLETSPLLNLKSVLECGSKKKSGDQTVSLFLSAKFRDRRYGFEYAAFDVKNYLERIMFSDIVSTVMIIYTSQSRNQEKYSPWVCHFHLDKEIVRRRNLKLCSIINSLKKRCGILRKESKVCFASMEISLNRKCSAAYMSQEGKITSTDKGMEGDDCITVTLVEYLNNSIPLDDVRDFMLPSLLGTTVKGFPEITKVDILWNSLPKSANSRIGCSGELYLRITMSSDNSSGRFWGVLINHCLPIMHMIDWTRSLPDNINHFCSAYGIDAGWKYFLQNLASATTDTGKTVLHKHLRLVADSLSVSGEFVGLNGKGMARQRQHASVSSPFVQACFSNPGSCFIKSAKAGVKDDLQGILDALAWGNCPPLGTSGQFEIIYSPKGQELAKSGDVYNLLKANFDQQSEKSSLPTDYKYSPEKWSSNVRPKNGGFGFKVHKQLKSLIRNFVTVNDIYKLTSASRNILNKYSIDEQLNEKDLFTMLKVLHFHPHRDEKYGSGPQHIKVGWHPEHKTTRCFFIERTDGTVEDFSYRKCILGALEIVAPDKAKTQKKKWKKDE* 1466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0910 1465 Pfam RNA polymerase Rpb1, domain 2 322 480 IPR000722 GO:0003677|GO:0003899|GO:0006351
Ahy15g0910 1465 Gene3D - 1353 1444 - -
Ahy15g0910 1465 SMART rpolaneu7 221 509 IPR006592 GO:0003677|GO:0003899|GO:0006351
Ahy15g0910 1465 CDD RNAP_IV_RPD1_N 24 857 IPR040403 -
Ahy15g0910 1465 Pfam Protein of unknown function (DUF3223) 1370 1442 - -
Ahy15g0910 1465 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 12 1289 - -
Ahy15g0910 1465 Gene3D RNA polymerase ii 355 407 - -
Ahy15g0910 1465 Gene3D - 318 488 - -
Ahy15g0910 1465 PANTHER DNA-DIRECTED RNA POLYMERASE 7 1351 IPR045867 GO:0003899|GO:0006351
Ahy15g0910 1465 PANTHER DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 7 1351 - -
Ahy15g0910 1465 Gene3D - 638 810 IPR038120 -
Ahy15g0910 1465 Gene3D RNA polymerase II, clamp domain 7 117 IPR044893 -
Ahy15g0910 1465 Pfam RNA polymerase Rpb1, domain 3 485 633 IPR007066 GO:0003677|GO:0003899|GO:0006351
Ahy15g0910 1465 Pfam RNA polymerase Rpb1, domain 4 697 774 IPR007083 GO:0003677|GO:0003899|GO:0006351
Ahy15g0910 1465 Gene3D RNA polymerase Rpb1, domain 3 489 635 IPR042102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0910 Ahy-Chr15 13503370 13516383 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0910 K16250 - gmx:100796185 2062.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0910 15 13503370 13516383 Ahy15g0910 15 13503370 13516383 ECH