Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0909 ATGAGAGGTTCGAAGCGTTTGGCTGTTTCGGAACCGAACCATACCGATACAAACGAAACAGTGTTTCGGAACAAAAGAATAATGGAAGGATCTCTTTTTGACGTTCATAGAGCTGAACCATCCCAGCAAACAATGGCAGTGCCATCATTGGATATGCGGCGGGCAGAGTCATCCCAGAAGCATGTGAGAGCCTTAAACACCCAGTTTGCAAGCTGGGTTCAAACACAATTACAGAATCACCCTGATGAGCTCTGGGAAGATGGTGTCAGAGATTACTTAGAACATGCTGCAGGCATTATGGAAAAGTTTAGTGATGTTGTAAACTGGATCAAAGCAAATGCCACCAAGGGGGAAAATTTGCCTGCTGATGTTGGTGCTTCTTTTGCCGGGAAAAAATTATCTCCAGATGTGACTAATAAAGAAAATAAAACTTCTGGAGAAAAAACTGGGTCTACTACAGCTAGTCCTGCTTCAAATTTTGCTAGTCCTGCTATGAGTTTTGGCAGTCCTGCTATGAATTTTGGCAGTCCTGCTACAAATTTTGCTAGTCCTGCTACAAATTTTTCTAGTCCTGTTACAAATTTTGCTACTCCTCTGCCAAACTTTGCTTCTTCTGCTGCGAACTCTGCTTCTTCTGCTGCAAACTTTGCCACTCCTGCTACTTCATGGGGTGCTGGATTATTCTCAAACAGTCAAAAACCTTTTACATTTGGTACTCAAAATTCGGCTCCCTCTAATAATGATGCTTCAGATGATGTAGATGGTGAAAATGACTTGGAGCAGCCCAGCAGTCCATCAGTGAAGAAGTCAGAAGAGAAAGGTATCATAGTTGTGCATGAAGTGAAGTGCAAACTATTTGTAAAGTCAAGTGATACAGATGTTAAGAATGTATGGAAAGATAAAGGAATGGGTCAACTGTGTATTAAATGCAAAGAAGGTGTCAGCAAGGCTACCAAGGAGTCCAAACCAACAATCATTGTTCGAAATGAGGTAGGGAAAATTCTTCTCAATGCCTTGTTGTATCCAGGAATAAAGACGCATCTACAGAAGAATACTCTTGTTGCGATATTCCACACGTCGGATATTGCTGATGGAAGTGGTGAAAATAATGATAGCGTTGTTGCACGCACCTTCTTGATAAAAGTGAAAACAGAAGAAGATCGAAATAAATTGGCATCAATAATCCAAGAATATGCTCCAGGATCTTGA 1209 0.4119 MRGSKRLAVSEPNHTDTNETVFRNKRIMEGSLFDVHRAEPSQQTMAVPSLDMRRAESSQKHVRALNTQFASWVQTQLQNHPDELWEDGVRDYLEHAAGIMEKFSDVVNWIKANATKGENLPADVGASFAGKKLSPDVTNKENKTSGEKTGSTTASPASNFASPAMSFGSPAMNFGSPATNFASPATNFSSPVTNFATPLPNFASSAANSASSAANFATPATSWGAGLFSNSQKPFTFGTQNSAPSNNDASDDVDGENDLEQPSSPSVKKSEEKGIIVVHEVKCKLFVKSSDTDVKNVWKDKGMGQLCIKCKEGVSKATKESKPTIIVRNEVGKILLNALLYPGIKTHLQKNTLVAIFHTSDIADGSGENNDSVVARTFLIKVKTEEDRNKLASIIQEYAPGS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0909 402 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 5 400 - -
Ahy15g0909 402 MobiDBLite consensus disorder prediction 235 250 - -
Ahy15g0909 402 CDD RanBD_NUP50 271 399 - -
Ahy15g0909 402 MobiDBLite consensus disorder prediction 129 157 - -
Ahy15g0909 402 ProSiteProfiles Ran binding domain type 1 profile. 269 397 IPR000156 GO:0046907
Ahy15g0909 402 Gene3D - 121 401 IPR011993 -
Ahy15g0909 402 PANTHER RAN BINDING PROTEIN 5 400 IPR045255 -
Ahy15g0909 402 MobiDBLite consensus disorder prediction 235 271 - -
Ahy15g0909 402 SUPERFAMILY PH domain-like 269 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0909 Ahy-Chr15 13458893 13463809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0909 K14295 - gmx:100816975 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0909 15 13458893 13463809 Ahy15g0909 15 13458893 13463809 ECH