Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0776 ATGAAGTGTCCATTCTGCTCGGCTACGCAGGGGCGGTGCGCCACCACGAGCTCCGGTCGATCGATCACGGAGTGCACGTCATGCGGGCGCGTGGTGGAGGAGCGGCACTCCCACCCACACCACCTGTTCCACGTGCGGGCCCAGGATAACCCTCTATGCCTCGTGACCTCTGATCTCCCCAACCCCGAACCCTCTCCAATCACCAAGGACGACGATCCTTTCGAGCCCACGGGCTTCATAACCGCCTTCTCCACCTGGTCCCTTGAACCCATCCCCCTCTACCTCCAGTCCTCTCTCTCATTCTCCGGCCACCTCGCGGAGCTCGAGCGCACTCTCGAATCCACCTCCTCCTCATCGTCGTCGTCGTCTTCTTCTTCTTCGACGGTTGTGGTGGATAATTTAAGGGCGTACATGCAGATTATCGATGTGGCCTCCATACTTGGCTTAGACTGCGATATTTCCGACCACGCTTTTCAGCTGTTCAGGGATTGTTGCTCGGCTACTTGCCTCAGAAACCGTAGCGTTGAGGCTCTTGCTACTGCCGCTCTTGTTCAAGCCATTCGAGAGGCCCAAGAGCCTCGAACCCTTCAGGAAATTTCAATAGCAGCTAATGTACCACAAAAGGAAATTGGGAAGTATATGAAGATTCTGGGAGAAGCTTTACAGCTAAGTCAACCTATTAACAGCAATTCCATATCAGTCCATATGCCAAGATTTTGCACGCTCCTACAGCTCAACAAATCTGCTCAGGAACTGGCTACTCACATAGGAGAGGTTGTGATCAACAAATGCTTCTGCACTCGTAGGAATCCAATTAGCATTTCAGCTGCTGCTATATATTTGGCTTGCCAACTCGAAGACAAACGTAAAACTCAGGCTGAAATTTGCAAGGTAACTGGCCTTACTGAAGTCACTCTACGTAAAGTGTACAAGGAACTACTGGAGAATTGGGATGATTTGCTTCCATCAAATTACACCCCGGCTGTGCCTCCAGAGAGAGCATTTCCCATGACCGTAATTGCTTCTGGTCGCTCCACAACAGCTAAGGTTGATGCAATAGAGGCCACTTTGGACACAGAGAAGTTGCCAGAAATCAAACCTAACAAACCGACTGAGGTCTCAGTCACTGTGCAACAGCCCAGAGGGAAGGATGAGGCCGAAGTTAAAAGCAATGCCCGTGCCGCCAACCATCCCACACAGAATCAACAGTCAACTTATTGGCAATCCCAGCTTCCCAGTGGGACAAACAGTCATCCTAATGTTTTGCAAGGAATGGATATCGACAGATCAGAGAGTAACCACCCCCACACTGAAAAGATGGCAGAGGACACAAATGGCACTGCCAGTGCCAATTCTCTAAACCCAAGCCAACTTTACAGTCCTCCTGGTTCAAGTGCAAGCTCTGTTATGAGGCAGTTTTCAGCTTCCCCTTCATCTGGACACGTGAATGTTCGATTAGCGCAGTCACCTAAGACAATGCCAGGTTATCCGGAGAACTGA 1500 0.5067 MKCPFCSATQGRCATTSSGRSITECTSCGRVVEERHSHPHHLFHVRAQDNPLCLVTSDLPNPEPSPITKDDDPFEPTGFITAFSTWSLEPIPLYLQSSLSFSGHLAELERTLESTSSSSSSSSSSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYMKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPMTVIASGRSTTAKVDAIEATLDTEKLPEIKPNKPTEVSVTVQQPRGKDEAEVKSNARAANHPTQNQQSTYWQSQLPSGTNSHPNVLQGMDIDRSESNHPHTEKMAEDTNGTASANSLNPSQLYSPPGSSASSVMRQFSASPSSGHVNVRLAQSPKTMPGYPEN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0776 499 PRINTS Transcription initiation factor IIB signature 235 253 IPR000812 GO:0006352|GO:0070897
Ahy15g0776 499 PRINTS Transcription initiation factor IIB signature 180 199 IPR000812 GO:0006352|GO:0070897
Ahy15g0776 499 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Ahy15g0776 499 PRINTS Transcription initiation factor IIB signature 206 221 IPR000812 GO:0006352|GO:0070897
Ahy15g0776 499 PRINTS Transcription initiation factor IIB signature 269 285 IPR000812 GO:0006352|GO:0070897
Ahy15g0776 499 PRINTS Transcription initiation factor IIB signature 301 315 IPR000812 GO:0006352|GO:0070897
Ahy15g0776 499 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 496 IPR000812 GO:0006352|GO:0070897
Ahy15g0776 499 Gene3D - 234 330 - -
Ahy15g0776 499 MobiDBLite consensus disorder prediction 393 427 - -
Ahy15g0776 499 SUPERFAMILY Cyclin-like 232 330 IPR036915 -
Ahy15g0776 499 CDD CYCLIN 136 217 IPR013763 -
Ahy15g0776 499 MobiDBLite consensus disorder prediction 442 486 - -
Ahy15g0776 499 Pfam Transcription factor TFIIB repeat 136 217 IPR013150 GO:0017025
Ahy15g0776 499 Pfam Transcription factor TFIIB repeat 234 315 IPR013150 GO:0017025
Ahy15g0776 499 SUPERFAMILY Cyclin-like 135 225 IPR036915 -
Ahy15g0776 499 MobiDBLite consensus disorder prediction 361 499 - -
Ahy15g0776 499 SMART cyclin_7 138 219 IPR013763 -
Ahy15g0776 499 SMART cyclin_7 234 315 IPR013763 -
Ahy15g0776 499 Gene3D - 134 225 - -
Ahy15g0776 499 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 496 - -
Ahy15g0776 499 CDD CYCLIN 236 314 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0776 Ahy-Chr15 10588362 10591298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0776 K03124 - gmx:102662353 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0776 15 10588362 10591298 Ahy15g0776 15 10588362 10591298 ECH