Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0620 ATGGACTCGGTGGCTTTTAGACTCGCTTCTCCTCCTTTTCCCTCACCCACGCGCCGCCTCCCTTCCAAACCTCACGCGCCACCTTCTTTCCCTTGTTTCCGCCGATTGCCGCTTCTTTTCCCACGGCTTCGCCACTTTCCCCCTCCCTCTGCTGCCAACAGCACCCTCACCGCCAATTCGCGAAGAGGTGGTTATTACACAGTTGGTGACTTCATGACAAAGAAAGAGGAGTTGCATGTGGTAAAGCCCACAACAACTGTGGATGAAGCTCTGGAAATTCTTGTTGAGAATAGGATAACTGGCTTTCCTGTCATTGATGATAATTGGAACTTAGTTGGTGTTGTTTCAGACTATGACTTGTTAGCACTGGACTCAATATCAGGTGGTGCAGGTCATGGGCGAAAAGATAACAGCATGTTTCCTGAAGTTGACAGCTCTTGGAAAACTTTCAATGAGGTTCAGAAACTGCTGAGTAAGACCAACGGCAAGGTCATCGGCGAATTAATGACCCCTGCACCCATGGTGGTTAGGGAAACAACTAATCTCGAGGATGCTGCTAGATTGTTGCTGGAAACGAAATTTCGACGGCTTCCGGTTGTAGATGCCGAGGGTAGGCTGGTGGGAATTATCACGAGAGGAAATGTTGTTAGAGCCGCACTTCACTTCAAAAAAGCTAACCAAAACAAAGCATGA 693 0.4834 MDSVAFRLASPPFPSPTRRLPSKPHAPPSFPCFRRLPLLFPRLRHFPPPSAANSTLTANSRRGGYYTVGDFMTKKEELHVVKPTTTVDEALEILVENRITGFPVIDDNWNLVGVVSDYDLLALDSISGGAGHGRKDNSMFPEVDSSWKTFNEVQKLLSKTNGKVIGELMTPAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALHFKKANQNKA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0620 230 Pfam CBS domain 165 220 IPR000644 -
Ahy15g0620 230 Pfam CBS domain 68 122 IPR000644 -
Ahy15g0620 230 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE ISOFORM X1 51 227 - -
Ahy15g0620 230 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 51 227 - -
Ahy15g0620 230 SUPERFAMILY CBS-domain pair 64 218 IPR046342 -
Ahy15g0620 230 CDD CBS_pair_plant_CBSX 74 218 - -
Ahy15g0620 230 ProSiteProfiles CBS domain profile. 72 131 IPR000644 -
Ahy15g0620 230 Gene3D - 63 226 IPR046342 -
Ahy15g0620 230 ProSiteProfiles CBS domain profile. 169 228 IPR000644 -
Ahy15g0620 230 SMART cbs_1 77 125 IPR000644 -
Ahy15g0620 230 SMART cbs_1 172 220 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0620 Ahy-Chr15 7896816 7900330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0620 - - gmx:100802500 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0620 15 7896816 7900330 Ahy15g0620 15 7896816 7900330 ECH
Ahy20g1591 20 57073256 57076905 Ahy15g0620 15 7896816 7900330 ECH