Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0517 ATGTACATGGCATTCTTTAAAAACCCTTTCTTTTTATTATTATCATTATGGGCTCTCGTATTATCTGGTGTGTGTGTTTGGGGAAAACCAGTTACATTCCTTCAAGACTTTAGAGTTACATGGTCTGATTCCCACATCAGGCAAATTGATAATCAAGGCACCGCCATACAACTCATTCTAGACCGAAATTCTGGATGCGGATTTGCTTCAAAGAGTAGGTACATGTTTGGGCGTATTAGCATGAAGATTAAGCTCATTGCCGGAGACTCTGCTGGGACTGTGACGGCATTTTATATGAGCTCGGACACGGACGCTATAAGGGACGAGCTTGACTTCGAGTTCTTGGGAAACCGTAGTGGTCAACCATACACTGTTCAGACTAACATCTATGCCCACGGCAAAGGGGGTAGAGAACAAAGGGTCAACCTCTGGTTTGATCCTTCCGCCCAATTCCACACTTACACTATTCTCTGGAACCACCACCACATTGTGTTCTACGTGGATGAGTTTCCGATAAGAGTGTACAAGAACGACGTGGCAAGGGGAGTGGCATACCCAAGAATGCAAGGAATGGGAGTGTACTCAACGCTGTGGGAAGCAGATAACTGGGCAACAAGGGGAGGCTTGGAGAAAATTGATTGGAGGAAAGCACCCTTCTATGCATACTACAAGGACTTCGACATTGAAGGCTGCCAACTCCCAGGGCCCACCAGTTGTGCCTCCAACGCAAGTAACTGGTGGGAGGGTGCTGCTTACCAGGCCCTTACTCCCACTCAAGCCCGCTTGTACAGGTGGGTTCGCATCAACCACATTATCTATGATTATTGCCAAGACAAGCCACGATTCCCACTCGGCCCACCACCCGAGTGCCTTTCCTAG 879 0.479 MYMAFFKNPFFLLLSLWALVLSGVCVWGKPVTFLQDFRVTWSDSHIRQIDNQGTAIQLILDRNSGCGFASKSRYMFGRISMKIKLIAGDSAGTVTAFYMSSDTDAIRDELDFEFLGNRSGQPYTVQTNIYAHGKGGREQRVNLWFDPSAQFHTYTILWNHHHIVFYVDEFPIRVYKNDVARGVAYPRMQGMGVYSTLWEADNWATRGGLEKIDWRKAPFYAYYKDFDIEGCQLPGPTSCASNASNWWEGAAYQALTPTQARLYRWVRINHIIYDYCQDKPRFPLGPPPECLS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0517 292 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 291 IPR013320 -
Ahy15g0517 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 11 291 IPR044791 GO:0004553
Ahy15g0517 292 ProSitePatterns Glycosyl hydrolases family 16 active sites. 109 119 IPR008263 GO:0004553|GO:0005975
Ahy15g0517 292 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 242 290 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Ahy15g0517 292 Pfam Glycosyl hydrolases family 16 35 215 IPR000757 GO:0004553|GO:0005975
Ahy15g0517 292 PIRSF EndGlu_transf 2 292 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy15g0517 292 Gene3D - 21 292 - -
Ahy15g0517 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 6-RELATED 11 291 - -
Ahy15g0517 292 CDD GH16_XET 31 290 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy15g0517 292 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 1 223 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0517 Ahy-Chr15 6221364 6223327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0517 3 290 Glycoside Hydrolase AT5G65730 69.521 9.39e-155 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0517 K08235 - gmx:100791974 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0517 15 6221364 6223327 Ahy15g0517 15 6221364 6223327 ECH