Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0503 ATGAGTGTGCAGCAAAATTCAGATGTGAATGTGCGAATTGCGAGAATCGCCTCCCATCTCAACCCTCCCAATCCCAAGGTGGAGGGTGATGGTGATGGGTGCTTGACGCGTGCACATTGCAGATCCAAAGGTGCTGCTCCGGGGTTCAAAGTGGCCATTTTGGGGGCTGCAGGTGGCATAGGACAGCCTCTCTCCATGTTGATGAAGATGAATCCTCTCATCTCCGTTCTCCACCTATACGACGTCGTCAACACCCCCGGCGTCACTGCTGATGTCAGCCACATGGACACTGGCGCTGTTGTACGGGGATTTTTGGGGGCAAGCCAACTTGAGGATGCCCTTACGGGGATGGATTTGGTGATCATTCCTGCTGGCGTTGCCCGCAAACCTGGTATGACAAGAGATGATCTCTTCAACATAAATGCTGGAATTGTTAAATCACTCTCCGAAGCAGTTGCAAGGTTCTGTCCCAAAGCTGTTGTCAACATCATAAGTAATCCTGTTAACTCCACGGTTCCAATTGCTGCTGAAGTTTTCAAAAAAGCTGGTACTTATGATCCTAAGAAACTTTTGGGAGTGACAAAGCTTGATGTTGTTAGAGCCAATACATTTGTGGCAGAAGTTCTAGGTGTTGATCCAAGGGATCTGGATGTCCCCGTCATTGGGGGACATGCAGGAATCACTATTTTACCTCTTCTTTCTCAGGTTAAACCTCCAAGCACTTTCACCGCAAAAGAGGTTGAGTACCTGACAGATCGCATACAAAATGGTGGAACTGAAGTTGTTGAGGCCAAAGCTGGAGCTGGCTCTGCAACTCTATCAATGGCATTTGCTGCTGCTAAATTTGCAGAATCATGCCTCCGTGCACTGAGAGGAGATGCCGGGATCATTGAATGTGCATATATTGATTCACAGGTGACTGAAATCCCATACTTTGCCTCAAAAGTGCGACTTTCCCGTGGTGGGGTTGAGGAAGTTCTTCCTCTTGGTCCCCTAAATGATTATGAGAGGGAGAGTTTGGAAAAGGCCAAGAAAGAGTTAGCAAGTAGCATCGAGAAAGGTGTTGCTTTCGTCAGAAAATGA 1083 0.4774 MSVQQNSDVNVRIARIASHLNPPNPKVEGDGDGCLTRAHCRSKGAAPGFKVAILGAAGGIGQPLSMLMKMNPLISVLHLYDVVNTPGVTADVSHMDTGAVVRGFLGASQLEDALTGMDLVIIPAGVARKPGMTRDDLFNINAGIVKSLSEAVARFCPKAVVNIISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTKLDVVRANTFVAEVLGVDPRDLDVPVIGGHAGITILPLLSQVKPPSTFTAKEVEYLTDRIQNGGTEVVEAKAGAGSATLSMAFAAAKFAESCLRALRGDAGIIECAYIDSQVTEIPYFASKVRLSRGGVEEVLPLGPLNDYERESLEKAKKELASSIEKGVAFVRK* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0503 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 49 192 IPR036291 -
Ahy15g0503 360 CDD MDH_glyoxysomal_mitochondrial 49 358 IPR010097 GO:0006099|GO:0030060
Ahy15g0503 360 PANTHER MALATE AND LACTATE DEHYDROGENASE 6 360 - -
Ahy15g0503 360 PIRSF Lac_mal_DH 48 357 IPR001557 GO:0016616|GO:0019752
Ahy15g0503 360 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 194 358 IPR022383 GO:0016616
Ahy15g0503 360 Pfam lactate/malate dehydrogenase, NAD binding domain 50 192 IPR001236 GO:0016491
Ahy15g0503 360 PANTHER MALATE DEHYDROGENASE, GLYOXYSOMAL 6 360 - -
Ahy15g0503 360 Gene3D - 194 360 IPR015955 GO:0003824|GO:0016616
Ahy15g0503 360 SUPERFAMILY LDH C-terminal domain-like 193 358 IPR015955 GO:0003824|GO:0016616
Ahy15g0503 360 Gene3D - 41 193 - -
Ahy15g0503 360 ProSitePatterns Malate dehydrogenase active site signature. 193 205 IPR001252 GO:0006108|GO:0016615
Ahy15g0503 360 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 50 359 IPR010097 GO:0006099|GO:0030060
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0503 Ahy-Chr15 6097785 6101232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0503 K00026 - gmx:732641 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0503 15 6097785 6101232 Ahy15g0503 15 6097785 6101232 ECH