Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0451 ATGTACGGTAACAGAGTGGCGGACGGTGCGGGCGTTGATCGCAGGAAGCGAATCAACGACGTTCTCGACAAGCACTTGCACCGATCCTCACCCTCCACTTCAACCTCCGCCTCTACTAGGCCTATCAAGGCCCAAATCCAGGCCCAAATCCAAGCCAACAACTCCGACGCCACACTCGAGGAATCGGAAACCGACACCGGGGGATCGGACGTTAGCGCCTCCGACGACGGGGAAGACACCTCGTGGATCGCGTGGTTCTGCAGCCTCAGAGGGAACGAGTTCTTTTGCGAGGTCGATGATGATTACATTCAGGACGATTTTAACCTTTGTGGTTTGAGCAGCCAAGTTCCTTATTACGATTATGCCCTTGACTTGATTCTTGACGTTGACTCCTCCCACGGAGACATCTTTACAGAAGAACAAAATGAGTTGATTGAATCCGCCGCGGAGATGCTTTATGGTCTCATTCATGCCCGCTACATTTTAACAGGCAGAGGAATGGCTGCCATGCTGGACAAGTACAAGAATTATGACTTTGGTAGGTGTCCAAGAGTTTACTGCTCAGGGCAACCGTGCCTTCCGGTGGGTCAGTCCGACATCCCTAGGTCGAGCACTGTAAAGATATATTGCCCCAGGTGTGAAGACATTTACTACCCGCGATCCAAGTATCAAGGTAATATCGACGGAGCTTATTTTGGAACTACATTTCCTAACCTCTTCCTGATGACTTATGGTCATCTGAAGCCACAAAAGCCATCACAGAGCTATGTTCCAAGAGTTTTTGGTTTTAAAGTTCACAAGCCATGA 807 0.4969 MYGNRVADGAGVDRRKRINDVLDKHLHRSSPSTSTSASTRPIKAQIQAQIQANNSDATLEESETDTGGSDVSASDDGEDTSWIAWFCSLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVDSSHGDIFTEEQNELIESAAEMLYGLIHARYILTGRGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPNLFLMTYGHLKPQKPSQSYVPRVFGFKVHKP* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0451 268 MobiDBLite consensus disorder prediction 21 76 - -
Ahy15g0451 268 MobiDBLite consensus disorder prediction 28 76 - -
Ahy15g0451 268 ProSitePatterns Casein kinase II regulatory subunit signature. 182 213 IPR000704 GO:0005956|GO:0019887
Ahy15g0451 268 PRINTS Casein kinase II regulatory subunit family signature 200 221 IPR000704 GO:0005956|GO:0019887
Ahy15g0451 268 PRINTS Casein kinase II regulatory subunit family signature 98 112 IPR000704 GO:0005956|GO:0019887
Ahy15g0451 268 PRINTS Casein kinase II regulatory subunit family signature 228 245 IPR000704 GO:0005956|GO:0019887
Ahy15g0451 268 PRINTS Casein kinase II regulatory subunit family signature 153 174 IPR000704 GO:0005956|GO:0019887
Ahy15g0451 268 PRINTS Casein kinase II regulatory subunit family signature 81 97 IPR000704 GO:0005956|GO:0019887
Ahy15g0451 268 PRINTS Casein kinase II regulatory subunit family signature 178 199 IPR000704 GO:0005956|GO:0019887
Ahy15g0451 268 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 74 178 IPR016149 GO:0005956|GO:0019887
Ahy15g0451 268 PANTHER CASEIN KINASE II SUBUNIT BETA-2 9 267 - -
Ahy15g0451 268 SMART CK_II_beta_2 81 264 IPR000704 GO:0005956|GO:0019887
Ahy15g0451 268 PANTHER CASEIN KINASE II SUBUNIT BETA 9 267 IPR000704 GO:0005956|GO:0019887
Ahy15g0451 268 Pfam Casein kinase II regulatory subunit 81 264 IPR000704 GO:0005956|GO:0019887
Ahy15g0451 268 Gene3D - 179 253 - -
Ahy15g0451 268 SUPERFAMILY Casein kinase II beta subunit 79 267 IPR035991 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0451 Ahy-Chr15 5252794 5255441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0451 K03115 - gmx:100793573 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0451 15 5252794 5255441 Ahy15g0451 15 5252794 5255441 ECH