Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0449 ATGGGTTGTTTTTGCTCCAAAGTAAGTAAACAAATTGCCGTGGAAGAAGAAGATCCAATGAGTCTTTCGAAGCAAACAGTTTTTAGTGTTAGTGAGGTTGAAGCACTGTTTGAGCTTTTTAAACGTATTAGTGGATCTGTCATTGATGATGGACTAATAAGCAAGGAAGAATTTATATTGGCGATTTTCAATAATAAGGAAAAAGACAATCTCTTTGCAAGTCGAATCTTTGATTTATTTGATGTAAAGAAGAAAGGAGTTATCGACTTTGGCGATTTTGTTCGAGCACTCAATGTTTTCCACCCACATACACCTCAAAAAGTCAAGATAGATTTTTCATTTAGACTCTACGATTTGGACAAATCAGGTTTTATAGAGCGCCATGAGGTAAAGGAAATGATACTTGCACTTCTCACTGAATCTGAAATGAAGCTACCGGATGAGATGATAGAAACAATTATAAACAAGACTTTCTTGGCGGCAGACCCAAACCAAGATGGGAAAATAGACGAGAATGAATGGGAGGCTTTTGTTACAAAAAATCCATCATTGCTGAAAATAATGACATTACCATACCTGAGTGACATAACAACAACATTCCCAAGTTTCGTATTTCACTCTAAGGTTGATGACAACGTTGGTGCTTGA 648 0.3642 MGCFCSKVSKQIAVEEEDPMSLSKQTVFSVSEVEALFELFKRISGSVIDDGLISKEEFILAIFNNKEKDNLFASRIFDLFDVKKKGVIDFGDFVRALNVFHPHTPQKVKIDFSFRLYDLDKSGFIERHEVKEMILALLTESEMKLPDEMIETIINKTFLAADPNQDGKIDENEWEAFVTKNPSLLKIMTLPYLSDITTTFPSFVFHSKVDDNVGA* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0449 215 ProSitePatterns EF-hand calcium-binding domain. 162 174 IPR018247 -
Ahy15g0449 215 PANTHER CALCINEURIN B-LIKE PROTEIN 1 213 - -
Ahy15g0449 215 PANTHER CALCINEURIN B 1 213 IPR045198 GO:0005509|GO:0019722|GO:0019900
Ahy15g0449 215 ProSiteProfiles EF-hand calcium-binding domain profile. 149 184 IPR002048 GO:0005509
Ahy15g0449 215 SMART efh_1 109 137 IPR002048 GO:0005509
Ahy15g0449 215 SMART efh_1 72 100 IPR002048 GO:0005509
Ahy15g0449 215 SMART efh_1 153 181 IPR002048 GO:0005509
Ahy15g0449 215 ProSiteProfiles EF-hand calcium-binding domain profile. 105 140 IPR002048 GO:0005509
Ahy15g0449 215 Gene3D - 18 212 - -
Ahy15g0449 215 PRINTS Recoverin family signature 14 28 - -
Ahy15g0449 215 PRINTS Recoverin family signature 123 141 - -
Ahy15g0449 215 PRINTS Recoverin family signature 76 97 - -
Ahy15g0449 215 PRINTS Recoverin family signature 169 189 - -
Ahy15g0449 215 ProSitePatterns EF-hand calcium-binding domain. 118 130 IPR018247 -
Ahy15g0449 215 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Ahy15g0449 215 SUPERFAMILY EF-hand 22 204 IPR011992 -
Ahy15g0449 215 Pfam EF-hand domain pair 109 177 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0449 Ahy-Chr15 5232643 5235218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0449 1 211 EF-hand Containing Proteins AT4G17615 69.668 2.10e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0449 K06268 - sly:100820708 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0449 15 5232643 5235218 Ahy15g0449 15 5232643 5235218 ECH