Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0393 ATGGCTTCTTCCACCGCCACCCAATTCTCCCTTTCCCTCTCCGCCAAACACGCAGCCCCAACAACAGCCTCCAAGCTACCCACTCGTGTCTCCTCGCTTCAAAAACCGAACTTGGTGCCACCCCACTTCGGATTACGATGTTCTCACAGTCAAAGTGTCCCTCTTTCGAAATCAAGGATTTGCGCTAGCTCAGCTCAAGTTATGGATCCCGTCACTTCCAAGAATGAACCCACCATCGTTGACGTCGATTTGGGCAACCGCAGCTACCCCATTTATATTGGATCCGCCTTGCTCCACAAACCCGAGCTTCTCCAGAGGCATGTCCATGGAAAGAGGGTTCTTGTGGTCACTAATAACACGGTTGCACCATTGTATCTAGACAAGGTCATTGATGCTTTAACAAAGGGAAACCCAAACGTTTCAGTCGAGAGTGTAATTTTGCCGGATGGCGAGCAGTACAAGGACATGGATACGCTTATGAAAGTCTTTGACAAGGCCATCGAGTCACGGTTGGACCGACGCAGTACATTTGTTGCCCTTGGAGGAGGTGTGATTGGAGACATGTGTGGCTATGCTGCTGCATCCTTTCTACGGGGTGTTAATTTTATTCAGATTCCTACCACTGTTATGGCTCAGGTTGATTCATCAGTTGGTGGTAAAACTGGGATAAATCATCGTCTTGGAAAGAATCTAATTGGTGCTTTTTACCAACCCCAATGTGTGCTTATTGACACAGACACATTGAATACGTTGCCAGATAGGGAGCTAGCATCAGGTTTTGCAGAGGTTATAAAGTATGGGCTTATTAGGGATGCAGAATTTTTTGAGTGGCAAGAGAAAAATATGCAGGCATTAATGGCAAGAGATCCTGCGGCACTGGCATATGCTATAAAGCGATCATGTGAAAACAAGGCTGAGGTTGTCTCCTTAGATGAGAAGGAAAGTGGAATGAGAGCAACATTAAACCTGGGTCATACATTTGGTCATGCAATAGAAACTGGAGTTGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTGCAGCTGGCACGGTAATGGCTGTTGACATGTCATATCGCTTAGGTTGGATTGATGATTCGATTGTGAAACGAGTTGGAGACATTTTAAAACAGGCTAAGTTACCTACTACACCTCCTGAAATCATGACGGTGGACATGTTCAAATCTGTGATGGCGGTTGATAAGAAGGTAGCAGATGGGTTGCTAAGACTTATCCTTCTGAAGGGTCCTCTGGGCAATTGTGTCTTCACTGGGGACTATGATAGAAAGGCACTAGATGATACTCTTCATGCATTCTGTAAATCCTGA 1326 0.4608 MASSTATQFSLSLSAKHAAPTTASKLPTRVSSLQKPNLVPPHFGLRCSHSQSVPLSKSRICASSAQVMDPVTSKNEPTIVDVDLGNRSYPIYIGSALLHKPELLQRHVHGKRVLVVTNNTVAPLYLDKVIDALTKGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRSTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGFAEVIKYGLIRDAEFFEWQEKNMQALMARDPAALAYAIKRSCENKAEVVSLDEKESGMRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSIVKRVGDILKQAKLPTTPPEIMTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLHAFCKS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0393 441 CDD DHQS 88 435 - -
Ahy15g0393 441 Pfam 3-dehydroquinate synthase 145 403 IPR030960 -
Ahy15g0393 441 Gene3D - 251 441 - -
Ahy15g0393 441 Gene3D - 66 250 - -
Ahy15g0393 441 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 77 437 - -
Ahy15g0393 441 TIGRFAM aroB: 3-dehydroquinate synthase 89 429 IPR016037 GO:0003856|GO:0005737|GO:0009073
Ahy15g0393 441 Hamap 3-dehydroquinate synthase [aroB]. 77 439 IPR016037 GO:0003856|GO:0005737|GO:0009073
Ahy15g0393 441 PANTHER 3-DEHYDROQUINATE SYNTHASE 77 437 - -
Ahy15g0393 441 SUPERFAMILY Dehydroquinate synthase-like 82 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0393 Ahy-Chr15 4605471 4608701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0393 K01735 - gmx:100806628 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0393 15 4605471 4608701 Ahy15g0393 15 4605471 4608701 ECH