Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0326 ATGGCGGTTCCACTCAGAATGAGCAACAACAATAAGCGGGCTGTGCTTGCTCGTTTGAAATCCCTCATCAACACACAGCAGTTGCAGAGGTTCTGCACTTCTATGCAGCCCAAAGGGAAACTGGATGATCGCTTGTCTCCAAAAGGGGACTTAGATTACTCGGCTCTGAAAGAACGCAATGACTTCTTGAAATGGAAGACTCTGGACGCTAGTAAGCTTGGTATAACTACTTCTAAGCTTTCGAATCCATCTCGGATTGTCTTGGAGCATCTTGACCTCATAGGAGTTAAGTCCTATTTGGTAGGTGGGTGTGTGAGAGATCTACTATTGAATAGAACTCCAAAAGATTTTGATGTCATCACCACAGGGGAGCTTCATAAGGTGAAAAAGCATTGTCGTAAAATAGGCCATGCTATAATTGTAGGGCGACGTTTTCCAGTATGCCTTGTTAATGTAGAAGGTTCTCAAATAGAGGTAACCAGTTTTGCGACAGAGGCACAGACATTTGAAGGGAGTGACCAAGTTCGACGCACTCTATTGCCCAAATCCAAATGCAATAATAAAGACGACTTAATTCGCTGCAAAAACTCCTTGTACAGAGACTTCACAATTAATAGTTTATTTTATGACCCCTCTGCTAATAAGATATATGATTATGCCAATGGAATCGCTGATTTGAGATCCTTGAAGCTTGAAACTGTGATCCCTGCTCAACTGTCCTTCAAAGAGGACCCTGGGAGAATTTTGCGTGGCTTCAGAATGGCAGCTCGACTAGGTTTATCGTTATCAAGGGAGATTGAGGCTGCTATTTTGGCTTATTCTTCACAAGTTAAGAACATGAACAAGACTAAATTACTGACTGAGGTGAACTATATGCTGTCTTATGGAGCTGCTGAACCATCTTTGCGCTTGCTCTGGAAATTCAAGTTGCTTGAGTTTTTATTTCCTGTGCATGCAGCATATCTTGATGAACAGGTGGATAAAGAAGGTGTTCTTGCTTCCAATATGTTGATGAAATTATTCCTCCATCTGGATAATTTGGTGGCATGTGATCGGCCTTCTGATTGCACTCTATGGATTGGGTTGCTAGCATTTCACCTGGCATTAGTAAATAACCCGCAAGAAGCCCTTGTGGTGTGGGCTCTTGCTTCTATTCTATATCATGGGAATTGGAAAGACGGTGTTAAATTCGCTAAAGAACATGCAGAAGTGACTGTTAATTTTGCACCTGAAATAAGGATGTCCTGTTTGAACAAATCGGAAGAAGAAATTGCAAAAGCAGTCACTGAATTGGCATCTCATGTGATACACTCTGTATGTGTGCTGGTTAATAATGATAGTCTTCGTCAATCCATGGCTAGATATCCATCTTCTCCATGCTCTGGCACTGTATTTGTACCAGGGAAAAAAGGGCAGATTGTTGGTGATATTTTCAGAGTGCTAGTCAATGATGTCCAACTGTATAGGAGTGAAAGAAAAGGTTCAAAGATAAAATATGGCATGCTTAGCCGGGGCAGTATTGAAGAGACTAGATATGTTTTCGGCAAAATTGTTCTCAACACTATGATTAGTTGCATTGTTGGGAACAAGGATGATTTTGAGGCTGAAAAATGTCATCTTAAGACTGAGGACACTGAGGAAAGTGGCCAGTCACAAATTTCAAATTCAGTAATCCATAAATCGGTTGCAAGGAAACATGAAAGACAAGCTTTATCACCAAGTCCAGAAAGTAAGCAAGGAAAAATCAAGAAACAGAAACTGGTTGACAATGACCGTGTTCCAGAGCAGAAAGTGGACATGGCGAGCCATGAATTGGTTTTCAAGGAAACCAGTCAAGAGTGGCAGAAGCAAGCAAAATTAACTCAGAAGGTTGATCCATCTATGATGAAGGGCTTTGTGCCGAAAATGAAAAAACATCCAATAAAGCATCCAGCGAGGCCTATGAAGACAGTCAAACAGAACTCACACACACCATCACAATTTAAAGTGTCTAAGAATCATCATGAAGTAGCTGACAGCTGCAACATAAATGTGGATGCAAAAGCAACAAATAAGTCACACTTAAAGAAGAAAAGGTCCCAATCATCATCTGATGAAAAAGTTTTGAAGCATTCCCTTTCCAGTCTCTTCAGAAAATGA 2139 0.4091 MAVPLRMSNNNKRAVLARLKSLINTQQLQRFCTSMQPKGKLDDRLSPKGDLDYSALKERNDFLKWKTLDASKLGITTSKLSNPSRIVLEHLDLIGVKSYLVGGCVRDLLLNRTPKDFDVITTGELHKVKKHCRKIGHAIIVGRRFPVCLVNVEGSQIEVTSFATEAQTFEGSDQVRRTLLPKSKCNNKDDLIRCKNSLYRDFTINSLFYDPSANKIYDYANGIADLRSLKLETVIPAQLSFKEDPGRILRGFRMAARLGLSLSREIEAAILAYSSQVKNMNKTKLLTEVNYMLSYGAAEPSLRLLWKFKLLEFLFPVHAAYLDEQVDKEGVLASNMLMKLFLHLDNLVACDRPSDCTLWIGLLAFHLALVNNPQEALVVWALASILYHGNWKDGVKFAKEHAEVTVNFAPEIRMSCLNKSEEEIAKAVTELASHVIHSVCVLVNNDSLRQSMARYPSSPCSGTVFVPGKKGQIVGDIFRVLVNDVQLYRSERKGSKIKYGMLSRGSIEETRYVFGKIVLNTMISCIVGNKDDFEAEKCHLKTEDTEESGQSQISNSVIHKSVARKHERQALSPSPESKQGKIKKQKLVDNDRVPEQKVDMASHELVFKETSQEWQKQAKLTQKVDPSMMKGFVPKMKKHPIKHPARPMKTVKQNSHTPSQFKVSKNHHEVADSCNINVDAKATNKSHLKKKRSQSSSDEKVLKHSLSSLFRK* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0326 712 Pfam Poly A polymerase head domain 99 230 IPR002646 GO:0003723|GO:0006396|GO:0016779
Ahy15g0326 712 MobiDBLite consensus disorder prediction 544 593 - -
Ahy15g0326 712 SUPERFAMILY Poly A polymerase C-terminal region-like 231 394 - -
Ahy15g0326 712 Pfam Probable RNA and SrmB- binding site of polymerase A 259 321 IPR032828 -
Ahy15g0326 712 SUPERFAMILY Nucleotidyltransferase 73 227 IPR043519 -
Ahy15g0326 712 Gene3D - 231 453 - -
Ahy15g0326 712 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 10 711 - -
Ahy15g0326 712 Gene3D Beta Polymerase, domain 2 65 228 IPR043519 -
Ahy15g0326 712 MobiDBLite consensus disorder prediction 638 712 - -
Ahy15g0326 712 MobiDBLite consensus disorder prediction 579 593 - -
Ahy15g0326 712 CDD NT_ClassII-CCAase 85 227 IPR002646 GO:0003723|GO:0006396|GO:0016779
Ahy15g0326 712 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 10 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0326 Ahy-Chr15 3930502 3936036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0326 - - ccaj:109801320 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0326 15 3930502 3936036 Ahy15g0326 15 3930502 3936036 ECH