Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0316 ATGGCCGTATCCGAAGCCTCAGCCTACCCTCCCATCGAGCCAACAAACTTCGATCTCATCATCGTTGGCACTGGCCTGCCGGAATCCATTCTCGCCGCCGCCGCATCCGCCGTCAAGAAGACTGTACTCCACCTCGACCCGAATTCCTTCTACGGAAGCCACTTCGCCACCCTCTCCCTAATTGATCTCACTTCTCATCTCAACTCCCATTCCGTCCCCGCACCACCACTACCACCATCTGCCGCCGGATCCGGTGATTCCGATTACGCCGTCGTGGACCTCGTCCACGATCCACTCTACTCCGATATTGAGGTCGAATGGCATGGTTCCGAGGACGAAACCTCGAAGATTCGAGAAGATTCCAGAAAATTCAACATCGATTTGGGAGGACCTAGGGCGCTGTTCTGCGCCGATAGTTGCATCGATCTGTTGCTGAAATCCGGAGCGGCACAGTATCTCGAATTCAAGGGCGTGGATGCGAGCCTCGTGTACGAGCCTAATGGCAGCGGTTTGGCGAACGTGCCGGATTCTCGCGGAGCGATTTTCAGGGACAAGAATCTTTCGCTGAAGGAGAAGAACCAGCTGATGAGGTTCTTCAAGCTCGTGCAGCAGCACCTTGCTGGTGGTGGCGATCAAAGTGAAAGTGGCGGCGACATTCAGAAGATTTCGCAGGAAGATCTGGAGAGTCCATTCGTTAGTTTCCTGGATAAGATGCGGTTGCCGCCAAAGATAAAATCAATTCTTTTGTATGCTATCGCCATGTTAGATTATGACCAAGACAATAATGAGGTTTGCAAAGATTTGCTCAAGACAAAGGATGGTATTGATCGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCTAATGCACCAGGGGCTTTGCTTTATCCTATTTACGGTGAAGGAGAACTACCACAAGCTTTCTGTCGCCGTGCTGCTGTCAAAGGTTGCATTTATGTTCTCAGGATGCCAGTTACTTCTCTGCTTATTGATAAGGTTACTGGGTGTTATAAAGGTGTCAGACTAGTTTCAGGTCAAGATTTATATAGCCATCAGCTAATCATGGATCCGTCATTTGTGATTCCATCACCACTGTCCCCATCTCTAGGCGATTTTCCCAGAGAGAAGATCCAATTATTGAGTCAGAGAGATTTGAAAGGAATGGTGGCCAGGGGGATATGCATCACAAGGAGTTCCATAAAGCCTGATTTATTAAATTGCTCAGTGGTGTATCCCCCTAGATCTTTGTATCCTGAACAAGTGACGTCGGTCAGAGCTCTTCAAATAGGATCAAACCTTGCTGTTTGTCCCGCGGGCACCTTTATTTTATACTTCTCCACTGTGTGCAATGATGCTGATGAAGGAAAGAAGTTATTAAAAGCAGCCATGAATGCTCTTCTTACACCGCCTGTGTCTGTAACCTCTGAAAGTAATCCAATTGTTCAAAGTGATAATGAAGATGTAAAACCCATTGTGCTCTGGAATGCATTTTATATCCAGAAAGTATTCACGGGTAAATTTGACTCTATGACCTCCGCTCCAACACCAGATGGAAATCTAAACTACGCTGACATTTTAGATGCGACTGAGAAGCTATTCGGTCAAATGTACCCAGATCAAGCATTCTTTCCAAAGACAGAATCACCTGAAGATACTATGGATGAGAATGGAGTGATTATGGAAAGCTAA 1692 0.4687 MAVSEASAYPPIEPTNFDLIIVGTGLPESILAAAASAVKKTVLHLDPNSFYGSHFATLSLIDLTSHLNSHSVPAPPLPPSAAGSGDSDYAVVDLVHDPLYSDIEVEWHGSEDETSKIREDSRKFNIDLGGPRALFCADSCIDLLLKSGAAQYLEFKGVDASLVYEPNGSGLANVPDSRGAIFRDKNLSLKEKNQLMRFFKLVQQHLAGGGDQSESGGDIQKISQEDLESPFVSFLDKMRLPPKIKSILLYAIAMLDYDQDNNEVCKDLLKTKDGIDRLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVTSLLIDKVTGCYKGVRLVSGQDLYSHQLIMDPSFVIPSPLSPSLGDFPREKIQLLSQRDLKGMVARGICITRSSIKPDLLNCSVVYPPRSLYPEQVTSVRALQIGSNLAVCPAGTFILYFSTVCNDADEGKKLLKAAMNALLTPPVSVTSESNPIVQSDNEDVKPIVLWNAFYIQKVFTGKFDSMTSAPTPDGNLNYADILDATEKLFGQMYPDQAFFPKTESPEDTMDENGVIMES* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0316 563 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 174 294 - -
Ahy15g0316 563 SUPERFAMILY FAD/NAD(P)-binding domain 14 371 IPR036188 -
Ahy15g0316 563 PRINTS Rab GDI/REP protein family signature 140 156 IPR018203 GO:0005092|GO:0007264
Ahy15g0316 563 PRINTS Rab GDI/REP protein family signature 191 206 IPR018203 GO:0005092|GO:0007264
Ahy15g0316 563 PRINTS Rab GDI/REP protein family signature 18 36 IPR018203 GO:0005092|GO:0007264
Ahy15g0316 563 PRINTS Rab GDI/REP protein family signature 301 322 IPR018203 GO:0005092|GO:0007264
Ahy15g0316 563 PRINTS Rab GDI/REP protein family signature 36 53 IPR018203 GO:0005092|GO:0007264
Ahy15g0316 563 SUPERFAMILY FAD-linked reductases, C-terminal domain 387 501 - -
Ahy15g0316 563 Gene3D - 14 543 IPR036188 -
Ahy15g0316 563 Pfam GDP dissociation inhibitor 16 73 IPR018203 GO:0005092|GO:0007264
Ahy15g0316 563 Pfam GDP dissociation inhibitor 111 465 IPR018203 GO:0005092|GO:0007264
Ahy15g0316 563 PANTHER RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A 13 552 - -
Ahy15g0316 563 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 98 503 - -
Ahy15g0316 563 PIRSF Rab_ger_ger_transf_A_euk 97 560 IPR001738 GO:0005968|GO:0006886|GO:0018344
Ahy15g0316 563 PIRSF Rab_ger_ger_transf_A_euk 5 107 IPR001738 GO:0005968|GO:0006886|GO:0018344
Ahy15g0316 563 PANTHER RAB GDP-DISSOCIATION INHIBITOR 13 552 IPR018203 GO:0005092|GO:0007264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0316 Ahy-Chr15 3804811 3810239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0316 K23460 - gmx:100795946 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0316 15 3804811 3810239 Ahy15g0316 15 3804811 3810239 ECH