Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0306 ATGGCGGCGCCAAGCATAAGACCTTTGCCGGAGGCCGTTCGCAGTTCAGTGCGTTCCGGCATCTTCTTGTTCGATTCCACCCGCGTCGTCGAGGAACTAGTTTTCAATAGCCTCGATGCTGGTGCCACAAAGGTTTCTGTGTTTGTTAGCATTGGGAGCTGTTACGTAAAAGTAGTAGATGACGGAGGTGGAATTGCTCGAGATGGACTTGAATTGGTGGGAGAAAGATACGCAACATCAAAACTTCGTAATTTGGATGACTTGAATGCCACCAGCGGAAACTTTGGTTTTCGTGGGGAAGCTTTAGCTTCCATTTCCGAAGTCTCTTTGTTGGAAATTGTGACAAGAACATACGGAAGGCCCAATGGATATAGAAAAGTATTGAAGGGGTGCAAATGCTTGTATCTTGGTGTTGATGATGATAGGAAGGAAGTTGGTACAACAGTTGCTGTCCGCGATTTATTTTACAACCAACCAGTTCGGAGGAAATACATGCAATCCAGTCCCAATAAGGTGCTGCAATCAATCAAGAAATGTGTACAGCGGCTTGCTCTTGTGCGTCCAAATGTTTCCTTCAAAGTTATCGATGTTGAAAGAGATGATGAGCTTTTCTGCACACAAATTGCTTCTTCTCCACTAGCACTTTTGACCAGCGGCTTTGGGGAGGAGGTATCAAGCTTTCTTCAAGCTTTAGAAGTTGAGAATGATATCATAAAGCTATCTGGATATGTCTCTGGCCCTTGCAATGCTTTGAATATGAAGGCTTTACAGTATGTCTATGTTAACTCACAGTTCGTTAGCAGTGGCCCAATTCATAAGCTTCTGAGTCAATTGGCTAATAGGTTTGAGCATCTGAATTCATGGAATACTAATAATGAGTTTGAAAACAAGAAGAAAAGTAGGTCTCAACCATGTCCAGCTTATATCTTGAATATAAGTTGCCCTCGTTCTTTCTATGATTTGACATTTGAACCATCAAAAACTTGGGTACAATTCAAGGATTGGGATTCTATACTCAACTTCATTGAGAAGGTCATAAAAGAATGCTGGGAGGAAAACCTAGATTGTGGAGAGTCCTTCAATCAGTCCACTTACATGGTACATGGAGATCAACCTTGGGAAGATCTCAACATTCTTTCAACAGAAGCAGATAAATCAAGATTTGGAAGCCATACTAAGAATTCCCAAGAACTCTCTGTTTCCACTTCAGGCAAGCTAACCAAAGATGAATATCATCAATCTGACAGGGAAGATGTTAGAACCTCTCTTGGTTACTTGTGTCAAGGGACTGAAATATTGAGAGAGAAACAAAACAAGAGAGACTTCTCTTATCAGACTCTTTTTTCTGGAAATTTAGTGGATGATTCATATGCCAGATGCATGCCAACTGTTGGAAAGCATAAGAGTTTATTGATGTATGATAAGAATGGTCAATCACTAGGAGATTACTTTTCAGATGATAATGTTCCTAGTGCAGAAATTTTATTTGATAATGTACCTTTTGATGCACCAAGTTCTTCAAAGGGAAGAAAATCCTGTGCTGTAGGAGCTGATATGATCAACGAATCATTTGAAGACTGCTTACTTAATGATAGCCATGGGTTTTGTAACAACGTAGAGGTAAATGAGGATTTTCAAAAGCCTTTTCTGAAAAGCTGTTCTATAAAAGGAAGTATCCTGCGAGAGAAGGCTTTCTTTATAAATGATGAACATGAACTCCACACTGATGGCTTTTGGAGAAAACAAACAAGGGAAGACTGTGACAGTCTGAAGGACTATGGTGCTCAACGCTGTTCAAATGTGAAAAAATTAAAATTGTCTAGAGATTGTGATTTTTTCTCTAGAGCAGTGGCTGAAGATCTTCCATATTCATACTATTCAGCAGCACAAACAATGAACTCTGGGACTGTTGATCAGCTATTTACTTCTGAATGGCATTCTGTCTATCAAGAAGCCTCATCTCCAGCCAGTGCATGGGGTGGTGATCATGCAGCTGATATTAATGATCTTGGACTTCATCGTACAATACTTACTGATGAGGAAGAAAATGACTGTGACTTTGTCTACGATATTTCAAGGAATGCCAAACGAAATGTCTTTGAATTTACTGATGCTATTGATTCGGAAATGATATTCGACACAGAGGTTGACTGGCCTGATCGTGGTCATAAATATTCTACTAAAAAAAGGCCAGATGTTTTATTTGAGGAATCTGAGTGCTTGTTGCCTGATACATGTGTTGAAAAGTGCAAAAGCCATGACAAGAACAAAAGCAGGATGGATCATTTGAGACATCCAGCATTGGACAAGAATAATGAAAGATCTAAAAGAAGCTCTTCAGCTCCACCATTCCATAAAAGGAAAAGGAGGTTTGTATCTTTAAATCAGCCATCAGAAATGATAGCCAAAAGGCCTACTGGCCAAGCCTCCAATCCTGCTTTCAACCATCCATCAGGAATGATAGCCAAAAGACTTACTGGCCAAGCCTCCAATCCTGCTTTCAACCATCGAGAAGCTTCTGATTTTATATATGCTCAACAATCTAGTGGAGCTCTTCACCCAAGCACTGAAGATCACTTTCTGCAAGAATTCAAATCTAATGTGAAACAGAGATCAGATGCTCTGGGAGATGCACATTGTAATGACAACAAGGAGATTGATGGGTTTGATAGTTTCAACATTCAGAACAATGCTCCACTCAGAGAGTTGTTCTCAAGGGAAGCACAAGATTCCATAGATCAGGGGATCAAATGGAGGACATGCTCACCTGAAATTCCAAAAAACAATAAAGTGGTTGAAGTTCAAAGTCAAAACAATATACTTGATATCTCTTCGGGATTTTTGCATCTTGCTGGAGATTCATTAATACCTGAAGCAATCAGTAAGAAATGCCTTGAAGATGCCAAAGTTCTCCATCAGGTGGATAAGAAATTCATTCCAGTTGTGGCTGGTGGAACCCTTGCTGTTATTGATCAGCATGCTGCAGATGAAAGAATCAGACTGGAAGAATTGCGGCAAAAGGTATTATCTGGAGAAGCAAAAGGAATAACCCATCTGGATGCTGAACAGGAACTGGTGCTGCCAGAGATTGGTTATCAACTACTTCATAGTTATAACGAACAGATTAAAGATTGGGGTTGGATGTGCAACATTCATGTTCATTCTGAACCCTATAAAAGGAATCTGGATGTTCTCAACAGACAACCTATGGCCGTCACACTTATAGCGGTTCCTTGTATTTTAGGTGTCAACTTAAATGATGTTGATCTTTTAGAGTTTCTTCAGCAGCTTGCTGACACTGATGGATCATCAACTATGCCGCCCTCTGTTATACGAGTCCTAAATTTGAAAGCATGCAGAGGTGCAATTATGTTTGGGGATTCATTGCTACCGTCAGAGTGTTCCCTTATAGTTGAAGAGCTAAAGCATACGTCACTTTGTTTCCAATGCGCTCATGGGCGACCGACAACTGTTCCTCTTGTCAACTTGGAGGCATTGCATAATCAGATAGCCAAGCTTGGACAAATGAATGGCTGCTCAAATGATAAGTTTCATGGATTACAAAGGCACAAAGTATGTGTTGAACGCACAGCAGAGCGTTTATCTTCTGCTAGAGGAACCTGA 3624 0.4042 MAAPSIRPLPEAVRSSVRSGIFLFDSTRVVEELVFNSLDAGATKVSVFVSIGSCYVKVVDDGGGIARDGLELVGERYATSKLRNLDDLNATSGNFGFRGEALASISEVSLLEIVTRTYGRPNGYRKVLKGCKCLYLGVDDDRKEVGTTVAVRDLFYNQPVRRKYMQSSPNKVLQSIKKCVQRLALVRPNVSFKVIDVERDDELFCTQIASSPLALLTSGFGEEVSSFLQALEVENDIIKLSGYVSGPCNALNMKALQYVYVNSQFVSSGPIHKLLSQLANRFEHLNSWNTNNEFENKKKSRSQPCPAYILNISCPRSFYDLTFEPSKTWVQFKDWDSILNFIEKVIKECWEENLDCGESFNQSTYMVHGDQPWEDLNILSTEADKSRFGSHTKNSQELSVSTSGKLTKDEYHQSDREDVRTSLGYLCQGTEILREKQNKRDFSYQTLFSGNLVDDSYARCMPTVGKHKSLLMYDKNGQSLGDYFSDDNVPSAEILFDNVPFDAPSSSKGRKSCAVGADMINESFEDCLLNDSHGFCNNVEVNEDFQKPFLKSCSIKGSILREKAFFINDEHELHTDGFWRKQTREDCDSLKDYGAQRCSNVKKLKLSRDCDFFSRAVAEDLPYSYYSAAQTMNSGTVDQLFTSEWHSVYQEASSPASAWGGDHAADINDLGLHRTILTDEEENDCDFVYDISRNAKRNVFEFTDAIDSEMIFDTEVDWPDRGHKYSTKKRPDVLFEESECLLPDTCVEKCKSHDKNKSRMDHLRHPALDKNNERSKRSSSAPPFHKRKRRFVSLNQPSEMIAKRPTGQASNPAFNHPSGMIAKRLTGQASNPAFNHREASDFIYAQQSSGALHPSTEDHFLQEFKSNVKQRSDALGDAHCNDNKEIDGFDSFNIQNNAPLRELFSREAQDSIDQGIKWRTCSPEIPKNNKVVEVQSQNNILDISSGFLHLAGDSLIPEAISKKCLEDAKVLHQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRQKVLSGEAKGITHLDAEQELVLPEIGYQLLHSYNEQIKDWGWMCNIHVHSEPYKRNLDVLNRQPMAVTLIAVPCILGVNLNDVDLLEFLQQLADTDGSSTMPPSVIRVLNLKACRGAIMFGDSLLPSECSLIVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLGQMNGCSNDKFHGLQRHKVCVERTAERLSSARGT* 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0306 1207 PANTHER DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 4 1165 IPR028830 GO:0006298
Ahy15g0306 1207 MobiDBLite consensus disorder prediction 392 407 - -
Ahy15g0306 1207 CDD HATPase_MutL-MLH-PMS-like 13 195 - -
Ahy15g0306 1207 Pfam DNA mismatch repair protein, C-terminal domain 220 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
Ahy15g0306 1207 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 96 102 IPR014762 -
Ahy15g0306 1207 MobiDBLite consensus disorder prediction 752 780 - -
Ahy15g0306 1207 Gene3D - 219 354 IPR014721 -
Ahy15g0306 1207 Gene3D - 973 1160 IPR042120 -
Ahy15g0306 1207 MobiDBLite consensus disorder prediction 799 815 - -
Ahy15g0306 1207 MobiDBLite consensus disorder prediction 752 818 - -
Ahy15g0306 1207 Gene3D - 1014 1124 IPR042121 -
Ahy15g0306 1207 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 120 - -
Ahy15g0306 1207 SMART MutL_C_2 970 1129 IPR014790 GO:0005524|GO:0006298
Ahy15g0306 1207 Pfam MutL C terminal dimerisation domain 969 1129 IPR014790 GO:0005524|GO:0006298
Ahy15g0306 1207 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 27 203 IPR036890 -
Ahy15g0306 1207 TIGRFAM mutl: DNA mismatch repair protein MutL 6 330 IPR002099 GO:0005524|GO:0006298|GO:0030983
Ahy15g0306 1207 SUPERFAMILY DNA mismatch repair protein MutL 968 1160 IPR037198 -
Ahy15g0306 1207 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 4 1165 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Ahy15g0306 1207 SUPERFAMILY Ribosomal protein S5 domain 2-like 200 351 IPR020568 -
Ahy15g0306 1207 MobiDBLite consensus disorder prediction 387 413 - -
Ahy15g0306 1207 SMART DNA_mis_repair_2 216 351 IPR013507 GO:0005524|GO:0006298|GO:0030983
Ahy15g0306 1207 Gene3D - 5 209 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0306 Ahy-Chr15 3591979 3600147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0306 K08739 - gmx:100788019 1550.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0306 15 3591979 3600147 Ahy15g0306 15 3591979 3600147 ECH