Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0255 ATGAGAACATGGGTAGCTTTTCCTTTTCAATTGCTCATAAAGCATATAACAAGATGGGCTTCTCAAAATTTAGCCTTTCTTCCACCAAGAAGATCACCATCATCCAATTCATTTTCTTCACAGAACTACCATAAGGGAAGGTTCAGAAATTTTAAGGGGCAAAGAGATCTTATTCTATCAAATTCTCGTCCTCTGTTGTCATTTTTTGGTCATTGTTTTTCTACTGCCATTCAACTGTTCGAGGAAATGCCACAAAGGATCTTTCATGTCAATAATGTTGATTTTGGATTAGTTCTTGATTACATTAGATTGTCCCTCAAAAGACCAAGAACTGTGACTGCCTATGTTGCTCACTGTGCTTCCTTAAAAATAGGTGCTCTAGGTCACCTACCTATTTCAACATCTCTACTCACTGTTTATTCCAAGGCTGGAGATTTCAAATCTTCAAGAGATTTGTTTGGTGAGATTAACAACAGAGATATCATAGCTTGGAATGCCATTGTTGCAGCATGTCTTGAAAATAACTGCTATAGTAGAGCATTGGGATTCTTAGATGAAATGAGTAAGGCTCAAATTGGGTTTGATTCCACCACTCTATTGCTTATGGTATCAGTTTCACTCCACATGAAAAATTTTGAACATGGACAGGCAATTCATTGTTTGAGTGTAAAATCTGGGATGCTTGTGGATATCAGTCTAGGTAATGCTTTAACTGATATGCATGCAAAGTGCGGCGATCTAAGCTCCGCTGAGAGTCTATTTGAAGAGATGGAATATAAAGATGTTGTTTCATGGAATTCAATAATGAGAGGGAGCCTTTACAATAGTGATCCAGAGAAATCACTATATTACTTCAAAAGGATGACTTGTGCTGGAGAAACAGCCGATTGCATTGGTCTATCTTGTGCTATTTCGGCTTCTTCAAGGTTGGGAAAGTTGGCTTTTGGCCAGTCCATTCATGGGCAGGGAATCAAACTAGGTTACAGGGACAGATCACATGTTTCATTTTCCAACTCTCTCATTTCGTTGTATTCACAAAGTGGCGACATCAGCGACGCTGAGACAGTATTCAGGGAAATAGCACAGAAAGATGTCGTTTCCTGGAATGCAATGATGGAAGGATTTGCTTCAAATGAAAAAGTTAATGAAGTATTTGATCTTCTGCTTGAAATGCAAAGAACAGGATCTTTCCAACCTGATGTTGTAACATTTACCACCATACTTCCACTATGTGCAGAGCTTCTGCTCTCCAAAGAAGGAAGAACTATCCATGCATTCGCAATTCGACGACAGATGGTACCTGATCATCTTCCTATGCTGAACAGCCTGATAGACATGTACTCAAAGTTCAACCTTGTGGAGAAAGCCAGGATCTTGTTCAATTCTGCCTCACAGAGAGATTTGGTATCATGGAATGTAATGATATCTGGCTATTCCCAAAACAGTTATTCTGAGGAAGCTCGAGACTTGTTCAGGGAGTTGCTAAACCGGGTTCCAAATTGCAGTCCTTCAACTGTTTTTGCTATTCTTTCTTCCTGTGATTCCCTTGATAGTCTCCACTTTGGAAGATCAATTCACTGCTGGAAGTTAAAATCTGGATTTTTGAACAACATTCTTCTTGTAAATTCTCTCATGCACATGTATATCAATTGTGGTGACCTGAAAGCTGGTTTCTCAATTTTGCAAGAGAACTCTGCAGTTGCAGATATCGGTTCATGGAACACTCTTATTGTAGGTTGTGTAAGAGGTGACCATTTTCAAGAGGCTTTAGAAACTTTCAGTTTGATGAGGCAATTAGCTGCTTTCAACCATGACTCCATAACCATTGTGGGCGTCTTGTCAGCTTGTGCAAACCTAGGACTACTCAGCCAAGGAAAAACTCTCCATGGTCTTACCCACAAATCTCCTTTGCAGTCAGATACACGTGTTCAAAACTCGCTAATTACCATGTATGGCAGATGCGAGGACATCGACAGTGCCAGAGTAGTCTTCAAATTCTGCTCTGTTCCCAACCTATGCTCATGGAACTGCATGATCTCAGCTCTATCTCATAATAAAGAAAGTAGAGAAGCATTGGAATTCTTTCGTGATCTTCGGTTCAAACCAAATGAATTCACCATTGTGAGTATTCTGTCAGTTTGTTCTCAACTTGGCATCCTAAGACATGGAAAACAAGTTCATGGTCATGTGTTCAGGTCCAGAATTCAATGTAATTCTTTCATAGCAACAGCTCTTGTAGACTTGTACAGCAACTGTGGAAGACTGGACATTGCTCTCAAAGTGTTTAGACACTCAGAGAAGTCAGAATCAGCTTGGAACTCCACCATTGCTGCATATGGATATCATGGAAAAGGAGAGCAAGCAATTGAACTCTTCCATGAAATGTGCAAATCAGGAACAAGGGTGACAAAGAGCACTTTTGTTAGCCTATTATCTGCTTGCAGCCATTCAGGACTAGTTAACCAAGGTCTTTGGTTCTACAACCGAATGTTAGAGGAATACAGCGTGGAACCAGAGATTGAGCATCAAGTTTATGTGGTCGACATGCTAGGTAAATCAGGTAGGCTTGATGAGGCTTATGAGTATACAAAAGGCTTGGAATCAAAGGCCACTTCAGGTGTATGGGGAACACTTCTAAGTGCATGCAACTATCATGGAGCAATCAAGTTGGGGAAACAAGTAGCTCAACATCTCTTTGAAGTGGATCCTCAGAATGTTGGATATTACATATCATTGTCAAATATGTATGTTGCTGCAGGAAGCTGGAAAGATGCCACTGAATTGAGAGAGTATGTACAGGACCAAGGATTAAAAAAGGCTGCAGGCTATAGCCTTATTGATGTTGGCTTGGGACAGGAGAGTGCTTAA 2868 0.4034 MRTWVAFPFQLLIKHITRWASQNLAFLPPRRSPSSNSFSSQNYHKGRFRNFKGQRDLILSNSRPLLSFFGHCFSTAIQLFEEMPQRIFHVNNVDFGLVLDYIRLSLKRPRTVTAYVAHCASLKIGALGHLPISTSLLTVYSKAGDFKSSRDLFGEINNRDIIAWNAIVAACLENNCYSRALGFLDEMSKAQIGFDSTTLLLMVSVSLHMKNFEHGQAIHCLSVKSGMLVDISLGNALTDMHAKCGDLSSAESLFEEMEYKDVVSWNSIMRGSLYNSDPEKSLYYFKRMTCAGETADCIGLSCAISASSRLGKLAFGQSIHGQGIKLGYRDRSHVSFSNSLISLYSQSGDISDAETVFREIAQKDVVSWNAMMEGFASNEKVNEVFDLLLEMQRTGSFQPDVVTFTTILPLCAELLLSKEGRTIHAFAIRRQMVPDHLPMLNSLIDMYSKFNLVEKARILFNSASQRDLVSWNVMISGYSQNSYSEEARDLFRELLNRVPNCSPSTVFAILSSCDSLDSLHFGRSIHCWKLKSGFLNNILLVNSLMHMYINCGDLKAGFSILQENSAVADIGSWNTLIVGCVRGDHFQEALETFSLMRQLAAFNHDSITIVGVLSACANLGLLSQGKTLHGLTHKSPLQSDTRVQNSLITMYGRCEDIDSARVVFKFCSVPNLCSWNCMISALSHNKESREALEFFRDLRFKPNEFTIVSILSVCSQLGILRHGKQVHGHVFRSRIQCNSFIATALVDLYSNCGRLDIALKVFRHSEKSESAWNSTIAAYGYHGKGEQAIELFHEMCKSGTRVTKSTFVSLLSACSHSGLVNQGLWFYNRMLEEYSVEPEIEHQVYVVDMLGKSGRLDEAYEYTKGLESKATSGVWGTLLSACNYHGAIKLGKQVAQHLFEVDPQNVGYYISLSNMYVAAGSWKDATELREYVQDQGLKKAAGYSLIDVGLGQESA* 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0255 955 Pfam PPR repeat 572 598 IPR002885 -
Ahy15g0255 955 Pfam PPR repeat 674 699 IPR002885 -
Ahy15g0255 955 Pfam PPR repeat 469 495 IPR002885 -
Ahy15g0255 955 Pfam PPR repeat 263 292 IPR002885 -
Ahy15g0255 955 Pfam PPR repeat 743 763 IPR002885 -
Ahy15g0255 955 Pfam PPR repeat 440 462 IPR002885 -
Ahy15g0255 955 Pfam PPR repeat 163 190 IPR002885 -
Ahy15g0255 955 Pfam PPR repeat 235 261 IPR002885 -
Ahy15g0255 955 Pfam PPR repeat 134 159 IPR002885 -
Ahy15g0255 955 PANTHER BNAC03G22150D PROTEIN 65 449 - -
Ahy15g0255 955 PANTHER BNAC03G22150D PROTEIN 338 697 - -
Ahy15g0255 955 PANTHER BNAC03G22150D PROTEIN 453 947 - -
Ahy15g0255 955 SUPERFAMILY TPR-like 432 930 IPR011990 GO:0005515
Ahy15g0255 955 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 569 599 IPR002885 -
Ahy15g0255 955 Pfam PPR repeat family 770 815 IPR002885 -
Ahy15g0255 955 Pfam PPR repeat family 363 409 IPR002885 -
Ahy15g0255 955 Gene3D Tetratricopeptide repeat domain 427 496 IPR011990 GO:0005515
Ahy15g0255 955 Gene3D Tetratricopeptide repeat domain 727 823 IPR011990 GO:0005515
Ahy15g0255 955 Gene3D Tetratricopeptide repeat domain 625 726 IPR011990 GO:0005515
Ahy15g0255 955 Gene3D Tetratricopeptide repeat domain 327 415 IPR011990 GO:0005515
Ahy15g0255 955 Pfam E motif 888 946 IPR046848 -
Ahy15g0255 955 Gene3D Tetratricopeptide repeat domain 205 322 IPR011990 GO:0005515
Ahy15g0255 955 Gene3D Tetratricopeptide repeat domain 497 624 IPR011990 GO:0005515
Ahy15g0255 955 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 364 398 IPR002885 -
Ahy15g0255 955 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 467 497 IPR002885 -
Ahy15g0255 955 Gene3D Tetratricopeptide repeat domain 831 947 IPR011990 GO:0005515
Ahy15g0255 955 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 338 697 - -
Ahy15g0255 955 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 768 802 IPR002885 -
Ahy15g0255 955 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 230 264 IPR002885 -
Ahy15g0255 955 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 65 449 - -
Ahy15g0255 955 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 453 947 - -
Ahy15g0255 955 TIGRFAM PPR: pentatricopeptide repeat domain 771 801 IPR002885 -
Ahy15g0255 955 TIGRFAM PPR: pentatricopeptide repeat domain 366 400 IPR002885 -
Ahy15g0255 955 TIGRFAM PPR: pentatricopeptide repeat domain 674 699 IPR002885 -
Ahy15g0255 955 TIGRFAM PPR: pentatricopeptide repeat domain 572 597 IPR002885 -
Ahy15g0255 955 TIGRFAM PPR: pentatricopeptide repeat domain 469 497 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0255 Ahy-Chr15 3006192 3009398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0255 231 949 Glycoside Hydrolase AT3G49170 29.837 8.39e-104 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0255 - - ahf:112800190 1893.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0255 15 3006192 3009398 Ahy15g0255 15 3006192 3009398 ECH