LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy15g0251	ATGGAGCAGCTGAAAACAATCGGTCGCGAGCTGGCAATGGGTTCGCAAGGCGGATTCGGCCAATCAAAGGAGTTCCTGGATCTGGTAAAATCCATCGGAGAAGCCCGATCCAAGGCCGAAGAAGACCGCATCGTCCTCCGCGAGATCGAAACCCTAAAACGCCGCCTCCTCGAGCCCGATATCCCAAAACGCAAGATGAAGGAGTACATCATACGCCTCCTCTACGTCGAGATGCTTGGCCACGACGCCTCCTTTGGTTACATCCACGCCGTTAAGATGACTCACGACGACGCCTTACCTCTCAAACGCACCGGTTACCTCGCCGTCACGCTTTTCCTCTCCGACGACCACGACCTCATCATCCTCATCGTCAACACAATCCAGAAGGATCTGCGTTCCGATAACTACCTTGTTGTTTGTGCAGCGCTTAACGCCGTCTGCAAGTTGATTAACGACGAGACGATTCCTGCTGTGTTGCCTCAGGTTGTGGAGCTCTTGGGCCACTCTAAGGAGGCCGTTAGGAAGAAGGCCGTTATGGCGTTGCACCGCTTTTACCAGAAGTCACCCGGGGCGGTTTCGCACTTGGTTTCCAATTTTAGGAAGAGGCTGTGCGATAATGATCCTGGTGTCATGGGTGCCTCCCTTTGCCCGCTCTTTGATCTTGTAACCATTGATGCCAAATCTTATAAGGATCTTGTGAGTAGCTTTGTCAGTATCTTGAAGCAGGTTGCTGAAAGGAGGCTTCCTAAGAGCTATGATTATCATCAGATGCCCGCGCCGTTCATTCAGGTTAAGTTGCTAAAGATATTGGCACTGTTGGGGAGTGGGGATAAGCAAGCTAGTGAGAGCATGTATACTGTTCTTGGTGATATTATCAGGAAGAGCGATTCATCGACTAATATTGGGAATGCCGTTCTGTATGAGTGCATTTGTTGTGTGGCTTCCATACACCCCAATCCCAAGTTGTTAGAATCCGCTGCAGATGTTATTGCAAAGTTCTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTGAGTCCGCAGATAGCAGAACAACACCAACTAGCTGTGATTGACTGCTTAGAGGACCCTGATGATACTCTGAAGCGAAAGACTTTTGAATTGCTATATAAAATGACCAAGTCCTCCAATGTCGAAGTGATCGTTGACCGCATGGTTGACTACATGATCAGCATAAGTGATGACCATTATAAAACCTATATAGCATCTCGTTGTGTGGAACTTGCTGAGCAATTTGCTCCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCCGGAGATCTTGTGAACATTAAGGTGGCACATAATCTAATGAGGTTGATTGCTGAAGGGTTTGGAGAGGATGATGATGCTACAGATAGCCAGTTGAGATCATCTGCTGTTGAATCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCCATGTTTCTTCAGGTCATCTGTTGGGTTCTGGGTGAGTACGGCACAGCTGATGGAAAACATTCTGCTTCATATATCAGTGGAAAGTTATGTGACATTGCAGAAGCATATTCAAATGATGAAACTGTTAAGGCATATGCAATTTCAGCATTAATGAAAATTTATGCTTTTGAAGTAGCAGCTGGGAGGAAAGTGGATATGCTACCTGAGTGTCAATCTTTTATTGAAGAATTATTAGCATCTCACTCAACAGATTTGCAGCAACGTGCTTATGAATTGCAAGCCGTTGTTGGTTTGGATGCACAAGCTGTTCAAGCAATATTGCCACGAGACACAAGATGTGAAGAAATTGAGGTTGATAAGGACCTTTCTTTCCTCAATGGTTATGTAGATCAAGCAATAGAAAAGGGTGCTCAGCCTTACATTGCTGAGGATGAGCGTAATGGGATGGGTAATGTGAGCAACCTCAGAAGCCAAGACCAACATGAATCGATACAGCATGGTCTGAGATTTGAGGCATATGAACTTCCAAAGCCTCCAATGCAATCAAAAGTTGATCCAGTTTCATCAACAGATGTTGTTCCAGTACCTGAGGCATTATCTTATAGGGAGACCCATCCCATATCATCAGTGGGATCGACATCAGAGGCTGGGTCATCAGAGCTTAAGCTACGTCTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCAACTTATTCAACTCCAACATCATCTACCACGAATTCTCCTTCCGAAAAACCTGCAAATGGTGCTAGCCATGTGGATAGTGCAACAGCTTCCTATTCAAAGTCACGTGATAGTCAGAATACAAAAAAGACAGAGATTGATCCAGAAAAGCAGAAGCTTGCTGCTTCATTGTTTGGTGGATCATCACAACCTGAGAGAAGATCATCCACTGGTCATAAGGCTTCAAGATCTAGTGGTGGTGCTGCAGATGGATCTCGCGGATCTAAAGCTGTGGAGAAAACGATTCAACAACCACCGCCTCCAGATTTGCTCGACTTCAGTGATGAACCAACTGTTACTAGTGCCCTTCCTTCCGTTGATCCCTTCAAGCAATTGGAAGGACTTCTTGACTCAAGCATGAGTTCTACAACAAACCATAATGCAGGTACTGCCACTATTGCACCTGATATTATGTCACTCTATGGAGACAGTACTGCAAGTCAGGATAGTTTAGATATTTTTCATGGGTTGTCGACTGAACCTACTGGGGCTACTAGTGGAGAAACAACTGTGACAACTTTGCCGCAATCTGTGAAGGGTCCAAACGCTAAAGATGCCTTGGAGAAGGATGCATTAGTGAGGCAGATGGGGGTGAACCCTACTAGTCAAAATCCCAACTTGTTCAGGGACTTGCTTGGCTAA	2874	0.4544	MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLREIETLKRRLLEPDIPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDALPLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLRSDNYLVVCAALNAVCKLINDETIPAVLPQVVELLGHSKEAVRKKAVMALHRFYQKSPGAVSHLVSNFRKRLCDNDPGVMGASLCPLFDLVTIDAKSYKDLVSSFVSILKQVAERRLPKSYDYHQMPAPFIQVKLLKILALLGSGDKQASESMYTVLGDIIRKSDSSTNIGNAVLYECICCVASIHPNPKLLESAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMVDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDATDSQLRSSAVESYLRIIGEPKLPSMFLQVICWVLGEYGTADGKHSASYISGKLCDIAEAYSNDETVKAYAISALMKIYAFEVAAGRKVDMLPECQSFIEELLASHSTDLQQRAYELQAVVGLDAQAVQAILPRDTRCEEIEVDKDLSFLNGYVDQAIEKGAQPYIAEDERNGMGNVSNLRSQDQHESIQHGLRFEAYELPKPPMQSKVDPVSSTDVVPVPEALSYRETHPISSVGSTSEAGSSELKLRLDGVQKKWGRPTYSTPTSSTTNSPSEKPANGASHVDSATASYSKSRDSQNTKKTEIDPEKQKLAASLFGGSSQPERRSSTGHKASRSSGGAADGSRGSKAVEKTIQQPPPPDLLDFSDEPTVTSALPSVDPFKQLEGLLDSSMSSTTNHNAGTATIAPDIMSLYGDSTASQDSLDIFHGLSTEPTGATSGETTVTTLPQSVKGPNAKDALEKDALVRQMGVNPTSQNPNLFRDLLG*	958

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy15g0251	957	MobiDBLite	consensus disorder prediction	903	923	-	-
	Ahy15g0251	957	PANTHER	ADAPTIN, ALPHA/GAMMA/EPSILON	13	953	-	-
	Ahy15g0251	957	PANTHER	AP-4 COMPLEX SUBUNIT EPSILON-1	13	953	-	-
	Ahy15g0251	957	MobiDBLite	consensus disorder prediction	702	716	-	-
	Ahy15g0251	957	MobiDBLite	consensus disorder prediction	903	927	-	-
	Ahy15g0251	957	Pfam	Adaptin N terminal region	54	592	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Ahy15g0251	957	MobiDBLite	consensus disorder prediction	787	807	-	-
	Ahy15g0251	957	SUPERFAMILY	ARM repeat	39	607	IPR016024	-
	Ahy15g0251	957	MobiDBLite	consensus disorder prediction	701	833	-	-
	Ahy15g0251	957	MobiDBLite	consensus disorder prediction	731	768	-	-
	Ahy15g0251	957	PIRSF	AP4_epsilon	645	829	IPR017109	GO:0015031\|GO:0030124
	Ahy15g0251	957	PIRSF	AP4_epsilon	835	957	IPR017109	GO:0015031\|GO:0030124
	Ahy15g0251	957	PIRSF	AP4_epsilon	11	702	IPR017109	GO:0015031\|GO:0030124
	Ahy15g0251	957	Gene3D	-	12	607	IPR011989	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy15g0251	Ahy-Chr15	2911634	2918466	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy15g0251	K12400		-	gmx:100819573	1497.64

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy15g0251	15	2911634	2918466	Ahy15g0251	15	2911634	2918466	ECH