Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0250 ATGGCGACTGAATCTGCCGTGAAAGGACCTCCGTCGAATAGTCCCGGTGATTCGTACATAGGAAGCTTCATAAGCTTGCTTTCCAAGAGCGAGATTCGTTACGAGGGCATTCTCTATTTCCTCAACGTTCATGATTCCACCATCGGCTTGAAGAACGTTAGATCCTATGGAACAGAGGGGAGAAGAAAAGATGGTCCACAAATTCCTCCAAGTGAGAAGGTTTATGAATACATTCTTTTTCGAGGAAATGACATTAAGAATTTGCAGATCAAGTCTCCCCCAACATCTGCCAAATCAGAAGAGCAGATACATAATGATCCAGCTATTATACAATCACAGCTAAACTCTACAGCAGCCTCATTTGGTGGGAGAAATTCGACAGAATCTATTCAAAGGCAGGATAGTGTTGATATGTTTAGTAAAGCTATCCCTATTGGGTTGCTGTCATCTCAGTCTGCAACTCAGCTAAACCCTTCAGATCAGTCTGCTGCTACTCAAATTGCTGGTCATCCATCCTTTTCCACATCAATGTATTTGAACGGACACAGTGGAATATCAAGCAATAACTCTAATTCTCTGCTACATCCCGGTCTTCTTCAATTGCCGTCAATGGTAGCATCACCTTTACCTTACCAAAGTTGGATGCAAACTCCGGAAACTGAGGTTCCTAACAAAGTGGGATGGACACCTTTATCAGACTATGGTCTTCCTGTATCTTCTACTAATACTTCTCTTGTAAATCAAACTCGCTCTCCATCTCCTAACCCTTTACAAATTTCTGATTCACTTGATGTTAATTCCCTCTTACCTACTAAGGCACCCATGCCATATCCTACGCCCATGACTTTTGATGGATCAAACATACCTTCATTTTCTTCACCTCTCCAAGAAATAAATTCTATTGATAACCAAATATCTGAAAAAATTTGCCCTGACCCAAGGTCAATTTATCTTGGACATGCCTTTCATCATCCTTCTTCATTTGTAGGTTACAGTTCAGGCCCCTTGCCAATACCTCCATCTTTGTTAACTCCAGATCAATTTGCACATCCCAGAGAAAATGTATCTCCTTTAACACAGAATTTGACCCCTAATCAGAAAGATATGGGTTCTTTGATTCCAACATCTTCTAATTCCTCTGTATTGATGCCTTCTATAGTGTCTCAAGCACCACTACTGCCATTACCAACTTTAGTGCCAAAGCCTCACTCAATAGCTTCCCAGTTCAATGAAGAGTTTGATTTTGAGGCCATGAATGAAAAATTCAATAAAGATGAAGTATGGGGTTCTCTTGGAAAGGCAACTATGAACATAGAAGGAGTGGATGACAATGCTTCTTCTATCAGTTCAGGCGACAAAGACAGTCAAGGGAAGACACCAAGTCCCAAGTCTGCATACAAGAAAGATGACTTTTTTGACACAATTTCCTGCAACTCTGCGAGTAGTGGAAGGAATGGACAACACCGTTTATCTGAGAGAATAAAACTGGATACCGAGACGTTTGGCAATTTCCAACACAGGCCTAATTTTGGCTATGGTGGTGGTCGCGGTATGAATTTCAGAGGCTCAAATAATTGGGGAAGAGGTTATGGTTATGGTAGGAGAGGACGTGGCCCAAACTTTCATCGTTTCTAG 1635 0.4147 MATESAVKGPPSNSPGDSYIGSFISLLSKSEIRYEGILYFLNVHDSTIGLKNVRSYGTEGRRKDGPQIPPSEKVYEYILFRGNDIKNLQIKSPPTSAKSEEQIHNDPAIIQSQLNSTAASFGGRNSTESIQRQDSVDMFSKAIPIGLLSSQSATQLNPSDQSAATQIAGHPSFSTSMYLNGHSGISSNNSNSLLHPGLLQLPSMVASPLPYQSWMQTPETEVPNKVGWTPLSDYGLPVSSTNTSLVNQTRSPSPNPLQISDSLDVNSLLPTKAPMPYPTPMTFDGSNIPSFSSPLQEINSIDNQISEKICPDPRSIYLGHAFHHPSSFVGYSSGPLPIPPSLLTPDQFAHPRENVSPLTQNLTPNQKDMGSLIPTSSNSSVLMPSIVSQAPLLPLPTLVPKPHSIASQFNEEFDFEAMNEKFNKDEVWGSLGKATMNIEGVDDNASSISSGDKDSQGKTPSPKSAYKKDDFFDTISCNSASSGRNGQHRLSERIKLDTETFGNFQHRPNFGYGGGRGMNFRGSNNWGRGYGYGRRGRGPNFHRF* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0250 544 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 12 540 - -
Ahy15g0250 544 SUPERFAMILY Sm-like ribonucleoproteins 18 94 IPR010920 -
Ahy15g0250 544 CDD LSm14_N 16 90 IPR025609 -
Ahy15g0250 544 Pfam Scd6-like Sm domain 19 92 IPR025609 -
Ahy15g0250 544 SMART LSM14_2 13 114 IPR025609 -
Ahy15g0250 544 MobiDBLite consensus disorder prediction 442 462 - -
Ahy15g0250 544 MobiDBLite consensus disorder prediction 442 467 - -
Ahy15g0250 544 Gene3D - 11 94 - -
Ahy15g0250 544 SMART FDF_2 407 505 IPR019050 -
Ahy15g0250 544 ProSiteProfiles DFDF domain profile. 401 437 IPR025762 -
Ahy15g0250 544 Pfam FDF domain 408 503 IPR019050 -
Ahy15g0250 544 ProSiteProfiles FFD box profile. 464 479 IPR025761 -
Ahy15g0250 544 PANTHER SCD6 PROTEIN-RELATED 12 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0250 Ahy-Chr15 2899755 2903669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0250 K18749 - gmx:102669894 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0250 15 2899755 2903669 Ahy15g0250 15 2899755 2903669 ECH