Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0243 ATGGGTTTGCCGAGGTTTGGGCGTCCCAAGAATGGTGTTGAACTGAGTCCAAACCTGTATGTGGCAAATTGTGGACCTGCTGTGGGGATCTCCCATGATGACATTGCATCTGTTTTCTGCAAATTTGGGGAGCTCAAAGGGGTTTATGCAGCTGATGAGAGTGGCACACGTGTCATTGTGTCTTTCTCTGAAGAGGGTTCTGCACAATCTGCATTCAAGGCATTAGATGGAACCTCATGTCCTGAACTCGGAGGAAGGTCCTTGCATATTCGTTATTCAGTGATTCAGCCAACTCCAAAGGATGAAGTTAGTGACATGGTTCCAGTATCTATTAATGCATCGGAATTGAGTATTCCGGGACTTTACCTAGTGCACAACTTCATTAGCGCTAAAGAAGAAGAGGAATTACTCCAAGCTGTTGACAGTCGGCCTTGGAACAGTCTTTCCAAAAGAAGGGTTCAACACTATGGTTATGAATTTCGTTACGATATTAGGAATGTTAATACAAGGCATTGCTTAGGGCCTTGTATAATGGAGTTCAGAAAATATGAGAATGGTGATTGGCATACTAAAGTTGCCTCAAGTGCTGTTTCAGAAGGAGGAAGTCCGGAAGACGATTCAATTTTTTTAAGGAAGGCTATCTATCTACCCCCTCGATCTTTGCTACTCTTGTCTGGAGAAGCACGTTATGCATGGAACCATTATATTCCACACCACAAGGTTGACAAAGTGAACGGCAGAGTCATCAGAAGGGCATCAAGAAGGGTCTCTTTCACATTTCGAAAGGTGTTCATCCTGCTGATGAAATGTGGTTTCACTCGAACGGACCGATATTACATGACAATACAATGGGGTTATTCTGGAAGACCATGA 873 0.4364 MGLPRFGRPKNGVELSPNLYVANCGPAVGISHDDIASVFCKFGELKGVYAADESGTRVIVSFSEEGSAQSAFKALDGTSCPELGGRSLHIRYSVIQPTPKDEVSDMVPVSINASELSIPGLYLVHNFISAKEEEELLQAVDSRPWNSLSKRRVQHYGYEFRYDIRNVNTRHCLGPCIMEFRKYENGDWHTKVASSAVSEGGSPEDDSIFLRKAIYLPPRSLLLLSGEARYAWNHYIPHHKVDKVNGRVIRRASRRVSFTFRKVFILLMKCGFTRTDRYYMTIQWGYSGRP* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0243 290 SUPERFAMILY Clavaminate synthase-like 113 263 - -
Ahy15g0243 290 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 95 IPR000504 GO:0003723
Ahy15g0243 290 PANTHER UNCHARACTERIZED 174 272 - -
Ahy15g0243 290 PANTHER UNCHARACTERIZED 15 173 - -
Ahy15g0243 290 SMART rrm1_1 18 91 IPR000504 GO:0003723
Ahy15g0243 290 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKBH8 HOMOLOG 174 272 - -
Ahy15g0243 290 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKBH8 HOMOLOG 15 173 - -
Ahy15g0243 290 Gene3D - 7 107 IPR012677 -
Ahy15g0243 290 SUPERFAMILY RNA-binding domain, RBD 15 99 IPR035979 GO:0003676
Ahy15g0243 290 Gene3D - 171 265 IPR037151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0243 Ahy-Chr15 2697151 2702368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0243 K10770 K18670 oeu:111404274 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0243 15 2697151 2702368 Ahy15g0243 15 2697151 2702368 ECH