Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0203 ATGGGTAAAGGCAACCCACAGAGAGGAAGCACCGGCGACGAGCTTCATACGGCGGCAAGGTCCGGTGATCTCGTCGCTGTTCAGATGATTTTGACTTCAAACCCTTTGGCTGTTAATTCCAGAGACAAGCATTCCAGAACACCACTTCATTTAGCAGCATTTGCTGGACATTCAGAGATAGTAAGTTATCTGTGCAAGAATAAGGCTGATGTTGGTGCTTCTGCTATGGATGACATGGCTGCAATACACTTTGCTGCTCAGAAGGGGCATTTGGAAGTTGTTAAGGCTCTAGTTGCAGCTGGTGCATCCATCAAGGCTTGTACTCGCAAAGGCATGAATTCATTACACTACGCAGCTCAAGGTTCCCATCTGGAGCTTGTTAGGTACTTGGCCAAGAAAGGGGCGAGTCTTACTGCCAAGACAAGGGCGGGAAAGACCCCTTTGGATCTTGCTAACAATGAAGAAGTCCGCTCGTTTCTGGAGGAATTCGAAAGATCAGCCAAGAACAGAGCATCTAGCAACAAAGATAAAGCTGAACAGTCTGATCCAAAAGCATCCACGTTGGAATCAGAAGATAATTCAAGTGCCAAACAGCCTGCAGTGGCTGTTGATGAAGAAAACAGTGACAGAGAGAAGACAGAGACTAATGAGGATGACGAAAATAGTGATAGAGAGAAGAGGAAGGCTAACGAAGAGGATGCAAGAGAAGACTCATCACAATCAAAGAGGGCAAAAGTTAAGTTGAGCCATCTCCAAAGTTCAGATGATATCCAAGAAGAAGAAGAAGAAGACATGTAG 798 0.4561 MGKGNPQRGSTGDELHTAARSGDLVAVQMILTSNPLAVNSRDKHSRTPLHLAAFAGHSEIVSYLCKNKADVGASAMDDMAAIHFAAQKGHLEVVKALVAAGASIKACTRKGMNSLHYAAQGSHLELVRYLAKKGASLTAKTRAGKTPLDLANNEEVRSFLEEFERSAKNRASSNKDKAEQSDPKASTLESEDNSSAKQPAVAVDEENSDREKTETNEDDENSDREKRKANEEDAREDSSQSKRAKVKLSHLQSSDDIQEEEEEDM* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0203 265 ProSiteProfiles Ankyrin repeat region circular profile. 77 106 - -
Ahy15g0203 265 ProSiteProfiles Ankyrin repeat profile. 44 76 IPR002110 GO:0005515
Ahy15g0203 265 PANTHER - 4 263 - -
Ahy15g0203 265 MobiDBLite consensus disorder prediction 187 201 - -
Ahy15g0203 265 ProSiteProfiles Ankyrin repeat profile. 110 142 IPR002110 GO:0005515
Ahy15g0203 265 PANTHER ANKYRIN REPEAT PROTEIN 4 263 - -
Ahy15g0203 265 PRINTS Ankyrin repeat signature 45 60 IPR002110 GO:0005515
Ahy15g0203 265 PRINTS Ankyrin repeat signature 93 107 IPR002110 GO:0005515
Ahy15g0203 265 SMART ANK_2a 10 40 IPR002110 GO:0005515
Ahy15g0203 265 SMART ANK_2a 44 73 IPR002110 GO:0005515
Ahy15g0203 265 SMART ANK_2a 110 139 IPR002110 GO:0005515
Ahy15g0203 265 SMART ANK_2a 77 106 IPR002110 GO:0005515
Ahy15g0203 265 ProSiteProfiles Ankyrin repeat region circular profile. 44 71 - -
Ahy15g0203 265 MobiDBLite consensus disorder prediction 167 186 - -
Ahy15g0203 265 MobiDBLite consensus disorder prediction 167 265 - -
Ahy15g0203 265 ProSiteProfiles Ankyrin repeat region circular profile. 110 142 - -
Ahy15g0203 265 SUPERFAMILY Ankyrin repeat 15 156 IPR036770 -
Ahy15g0203 265 Pfam Ankyrin repeats (3 copies) 15 73 IPR002110 GO:0005515
Ahy15g0203 265 Pfam Ankyrin repeats (3 copies) 82 160 IPR002110 GO:0005515
Ahy15g0203 265 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Ahy15g0203 265 Gene3D - 9 186 IPR036770 -
Ahy15g0203 265 MobiDBLite consensus disorder prediction 203 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0203 Ahy-Chr15 2347937 2349603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0203 3 193 Miscellaneous Gene Families AT2G31820 28.507 3.80e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0203 - - ahf:112757970 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0203 15 2347937 2349603 Ahy15g0203 15 2347937 2349603 ECH