Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0136 ATGGATCATAATAATACTTTACGTCGTTTTGGGGAAATAATACCCAAAACTCATCGTAATCATAATTTTCTCTTATCACTCTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCATCACACGCAGCTTTTGACCTAGCTACCATCCCCTTCAACGATGGCTATTCTCCTCTCTTCGGAGATAGCAACGTCGTTCGCTCCGATGACGGCAACGGCGTTAATCTCCTCCTCGATCGCTTCACCGGTTCTGGCTTCATATCATCGAGTATGTACAAATATGGATTCTTCAGCGCTAATATCAAGTTGCCATCAAATTATACAGCTGGAATTTGCGTCGCTTTTTATACGTCAAATGGTGATGTGTTCGAGAAGACACACGATGAGTTGGACTTTGAATTCCTTGGTAACTTAGCGGGAAAACCGTGGCGGTTTCAGACCAACTTGTACGGCAACGGAAGCACCCACCGTGGCCGTGAGGAGAGGTATCGCCTGTGGTTTGATCCTACAAAGGAATACCATAGATACAGCATCCTTTGGACTGCCAAGAATGTTGTATTTTACATTGATGAAGTTCCAATTAGAGAGGTGCTAAGAAGTGCTGAAATGGGAGCTGATTACCCATCTAAACCAATGTCATTATATGCAACAATTTGGGATGCATCAAATTGGGCCACTTCAGGTGGAAAGTACAAAGTGAACTATAAATATGCACCTTTTGTAGCCGAATTTAAAGACCTAGTCCTCAAGGGTTGCTCCGTTGACCCTATTGAAGAGTCCACCGTGGCCGGCCGAAGCATTTGCTCCGACCAACACGCCGATCTTGAGGCACAAGACTATGCTGCCGTGACCCCAAGGCGCCGCCTAGCGATGCGCCGGTTCCGGCAGCGTTACATGTACTATTCTTATTGTTATGATACATTAAGGTACCCTAATCCATTACCTGAATGTGACATTATACCATCGGAGAAACAAAGATTTAAGGAGACTGGAAGGTTGAAATTCGGCGGCAGCCACCGCCGGCAGTCTCGGCGGAAGGGCCGGACTACAACTCCGGTGGATGATACCGATCAAGGTGATATGTGA 1086 0.4576 MDHNNTLRRFGEIIPKTHRNHNFLLSLFLFFFFFFFFFFSSHAAFDLATIPFNDGYSPLFGDSNVVRSDDGNGVNLLLDRFTGSGFISSSMYKYGFFSANIKLPSNYTAGICVAFYTSNGDVFEKTHDELDFEFLGNLAGKPWRFQTNLYGNGSTHRGREERYRLWFDPTKEYHRYSILWTAKNVVFYIDEVPIREVLRSAEMGADYPSKPMSLYATIWDASNWATSGGKYKVNYKYAPFVAEFKDLVLKGCSVDPIEESTVAGRSICSDQHADLEAQDYAAVTPRRRLAMRRFRQRYMYYSYCYDTLRYPNPLPECDIIPSEKQRFKETGRLKFGGSHRRQSRRKGRTTTPVDDTDQGDM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0136 361 PIRSF EndGlu_transf 17 322 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy15g0136 361 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 33 340 - -
Ahy15g0136 361 ProSitePatterns Glycosyl hydrolases family 16 active sites. 129 139 IPR008263 GO:0004553|GO:0005975
Ahy15g0136 361 SUPERFAMILY Concanavalin A-like lectins/glucanases 52 318 IPR013320 -
Ahy15g0136 361 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 43 244 IPR000757 GO:0004553|GO:0005975
Ahy15g0136 361 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 280 317 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Ahy15g0136 361 Pfam Glycosyl hydrolases family 16 55 236 IPR000757 GO:0004553|GO:0005975
Ahy15g0136 361 Gene3D - 39 317 - -
Ahy15g0136 361 MobiDBLite consensus disorder prediction 330 361 - -
Ahy15g0136 361 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 33 340 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0136 Ahy-Chr15 1640387 1645019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0136 14 339 Glycoside Hydrolase AT1G32170 68.098 1.31e-166 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0136 K08235 - gmx:100786236 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0136 15 1640387 1645019 Ahy15g0136 15 1640387 1645019 ECH