Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0083 ATGTGTGTCTTACTCCCTGCACCCGCTGAGCCCCGGCGGGACGAGATGGACGCTCTTTTGGAACCACCGAGTACTCTTTCCAGAACCCTAGATTCCGCACAATTGGTTCCTCCGTTCCCTAATCCGAACGACTCCTTCTCCGTAGAAACCCTAGCCTCCGACAACGCTCGTCCGTCGGCCGAGGCGGCGACACCTGCCACCGGCGATGATATCTATTCCGCCATTATAGGTAAGGAGGATCCGCTCGAGGATCTGGACCCGTCTTCCTCGTTTCGCATCTTTGACGACGATTTGTCTTCGTCGTTCACGGCGGCGCCGGCGCCGTTGTCGTCTTCGAAAGATTCCGATTCTTGGCTGTTCTCTGGAGACGCTGGTGATGAGCCTTCGATGAACGAGGACTCTGGTTCCGCAGTTGTACCTTCTAGAGTGGGAGCGGGGCTTTGGAATCTTGGTAACACATGCTTTCTAAATGCGATTGTGCAGTGCTTTACGCACACAGTGCCGCTAGTCCAGGGTCTTCGATCATGCATTCATTCTGCACCTTGCGACGGTGATGGTGATAGGTTTTGCGTTATTTGTGCCCTCCGTGAGCAGATTGAAAGCTCCTTAGGAGCTTCAGGAGGAGTTCTTTCACCTTCAAAGCTTGTTGATAATTTGAACCATTTTTCATCCATGTTTAGAAGATACCAGCAGGAGGATGCCCATGAATTTATGCAGTGTGTCTTAGATAAGCTTGAAATGTGTTTTAAAGATTTGAAAAAGAATAGTACGAGTTTTGAAGATGATAATCTAGTAGAGAAAGTATTTGGAGGTCGATCCCTTAGTAAGCTGCGTTGCTGTAACTGTGGCCATTCTTCTGACACTTATGAACCACTGATTGACCTGAGTTTGGAGATAGATAATGTAGATACACTTTCAAGTGCTCTGGAGTCATTCACTAAGGTGGAGAACATTGATGCTAAGTTTAAATGTGATAGCTGCAAGGAAGAAGTGTCAATGGAGAAGCAAATTATGCTGGATCAGACTCCTTCAATTGCAACTTTTCATTTAAAGAGATTTAAGACAGATGGGACCTATGTTGAAAAGATTGATAAGCATGTAAATTTCCCACTGGAGTTGGACTTACAGCCTTACACCATTTCTCATCAAAACAATAATGTGCCATTGAAATATGAACTGTATGCAGTTGTTGTGCATATTGGGTTTTCGTCTACTTCAGGACATTACTTTTCCTTTGTTCGCTCTGCACCAGATACATGGCATAAGTTGGATGATTCAAAGGTCACTATGGTCTCAGAAGAATCTGTCTTGTCTGAAGAGGCATACATACTGTTTTATGCGAGACAGGGTACACCATGGCTTTCAAGTATTATGGAACTAATGCCGTGCACAGGTCCAAATACTTTGAATACATCTCCAAAGTCTGTTCTAGATATCATTGACAACAAATATACAGCAAATCCTGTTATAACTGCAAATACTGAAGGGAGCAAGGTTAGTGAACCTGGCAAATTTTTGGAGCAGCAATTTCATTATTCTTGTCAAAAAAGACACGAGTTGCACGAGATCAATGATGTTGGGGATACTTCTCATGACTGCAAGCAATCTCCTCCTAGGCCAAATTGTGTTGGTTTTAGTGGCTCTAATGTTTCCCTTAATACCCAAATGCCACTTCCAAATAATGCCATCCCGAATATTGGTGGTTCATCTTTCAATGGAAATTCACCTACTGATGGTAGTCCTGATAAAAACAAGCACAGCGGGGAAGCTGTTGACATTGCTGTGAATGACAGTTTTCATCCCTTAACACCACCCAGCTCACCTCTATATACTCCAGATCAGAGTTACTATATTCCACGTGATCATTTGAAGTCAGAGAATCGCATCAGATGTAAAAGATCATTAAATACACTAGTGTTGGATTCTGAGAGACAAGAAGCTCTGAAATGTGTTAAGAAGATGTCTGGTTCAAGGAAAGAAGCATTGCTGCAGTTTGTTAGTCCAATCAGTGAACCCTCCAACAAAAGGAAAAGGAAGATTGATTCTTCACTGTGTAAGAAACGCAGCCCTCATAGTGCTTCCTCAAAATCAAACCATTTGCGCCCCGTGGCTGCAGGAATTTCTCGAAATTGCAACTTTGGACATCGGTTATCTTCGCTGGCTTTGGGACTCCCCCTTCTTGGACATCCAACTCCTCATGTTCTCTTCACTCGTTATTATTTAATATTAGGCAAATTCTCAAGTGACTTTGATTTTAACGCGGAAATGATTATATTTTAA 2280 0.4338 MCVLLPAPAEPRRDEMDALLEPPSTLSRTLDSAQLVPPFPNPNDSFSVETLASDNARPSAEAATPATGDDIYSAIIGKEDPLEDLDPSSSFRIFDDDLSSSFTAAPAPLSSSKDSDSWLFSGDAGDEPSMNEDSGSAVVPSRVGAGLWNLGNTCFLNAIVQCFTHTVPLVQGLRSCIHSAPCDGDGDRFCVICALREQIESSLGASGGVLSPSKLVDNLNHFSSMFRRYQQEDAHEFMQCVLDKLEMCFKDLKKNSTSFEDDNLVEKVFGGRSLSKLRCCNCGHSSDTYEPLIDLSLEIDNVDTLSSALESFTKVENIDAKFKCDSCKEEVSMEKQIMLDQTPSIATFHLKRFKTDGTYVEKIDKHVNFPLELDLQPYTISHQNNNVPLKYELYAVVVHIGFSSTSGHYFSFVRSAPDTWHKLDDSKVTMVSEESVLSEEAYILFYARQGTPWLSSIMELMPCTGPNTLNTSPKSVLDIIDNKYTANPVITANTEGSKVSEPGKFLEQQFHYSCQKRHELHEINDVGDTSHDCKQSPPRPNCVGFSGSNVSLNTQMPLPNNAIPNIGGSSFNGNSPTDGSPDKNKHSGEAVDIAVNDSFHPLTPPSSPLYTPDQSYYIPRDHLKSENRIRCKRSLNTLVLDSERQEALKCVKKMSGSRKEALLQFVSPISEPSNKRKRKIDSSLCKKRSPHSASSKSNHLRPVAAGISRNCNFGHRLSSLALGLPLLGHPTPHVLFTRYYLILGKFSSDFDFNAEMIIF* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0083 759 MobiDBLite consensus disorder prediction 558 581 - -
Ahy15g0083 759 Pfam Ubiquitin carboxyl-terminal hydrolase 146 446 IPR001394 GO:0004843|GO:0016579
Ahy15g0083 759 SUPERFAMILY Cysteine proteinases 144 448 IPR038765 -
Ahy15g0083 759 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 20 79 499 - -
Ahy15g0083 759 MobiDBLite consensus disorder prediction 32 65 - -
Ahy15g0083 759 Gene3D Cysteine proteinases 142 453 - -
Ahy15g0083 759 MobiDBLite consensus disorder prediction 558 587 - -
Ahy15g0083 759 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 391 409 IPR018200 GO:0004843|GO:0006511
Ahy15g0083 759 MobiDBLite consensus disorder prediction 673 699 - -
Ahy15g0083 759 MobiDBLite consensus disorder prediction 32 54 - -
Ahy15g0083 759 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 145 449 IPR028889 -
Ahy15g0083 759 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 146 161 IPR018200 GO:0004843|GO:0006511
Ahy15g0083 759 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 79 499 - -
Ahy15g0083 759 MobiDBLite consensus disorder prediction 105 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0083 Ahy-Chr15 952688 957551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0083 140 448 Miscellaneous Gene Families AT4G31670 32.704 9.77e-48 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0083 K11855 - gmx:100808015 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0083 15 952688 957551 Ahy15g0083 15 952688 957551 ECH