Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1207 ATGCAATTCTTGTCAGTGGGTTTACCGGCCAATAAGGTTCCGGTTCGGTCACTGAACATGAACCCAACAAGAATGTCAATGAAGGACCCTGGCAACATGGCTGTGGTGGCTGCACCCAAATGGGCCCAGAAAACCATTACTTTGCCTCCTCACAAACGCGGTTGTCATCTCGTTACTCCAAAGATAGTGAAAGAAATTGAACAAGATTTGTCTGGATTCAAGTGTGGCCTAGCTCATGTATTTTTGCATCACACAAGTGCTTCTCTAACCATCAATGAGAATTATGACTATGATGTTCGGGATGATACAGAAACGTTCCTCAATCGGATAGTTCCTGAGGGGCCATCTGCACCTTGGAGGCATACTATAGAGGGCCCAGATGACATGCCTGCACATATCAAATCATCTATGTTTGGTTGTGCACTCATGATACCTATCACGAATGGAAGGCTTAACATGGGAACATGGCAGGGTATATGGCTTTGTGAGCACCGGGATTATCCTACACCCCGCACAGTTGTCGTCACTCTCAATGGAATATGA 543 0.4586 MQFLSVGLPANKVPVRSLNMNPTRMSMKDPGNMAVVAAPKWAQKTITLPPHKRGCHLVTPKIVKEIEQDLSGFKCGLAHVFLHHTSASLTINENYDYDVRDDTETFLNRIVPEGPSAPWRHTIEGPDDMPAHIKSSMFGCALMIPITNGRLNMGTWQGIWLCEHRDYPTPRTVVVTLNGI* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1207 180 Gene3D - 33 179 IPR035917 -
Ahy14g1207 180 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 24 180 IPR001602 -
Ahy14g1207 180 SUPERFAMILY YjbQ-like 40 179 IPR035917 -
Ahy14g1207 180 Pfam Uncharacterised protein family UPF0047 58 176 IPR001602 -
Ahy14g1207 180 PANTHER - 24 180 - -
Ahy14g1207 180 TIGRFAM TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 49 179 IPR001602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1207 Ahy-Chr14 25212941 25215657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1207 - - gmx:100500593 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1207 14 25212941 25215657 Ahy4g1119 4 27388052 27390600 hybridization