Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1121 ATGCCACCGCCGCCACCAGCACCAGATCTTCCTGGGTTTTACTATGACCCTGAGAAGAATAGGTATTTCCCCATCAAAGGTCCCATACCAGGCTCTTCTCGTTCTTCCTTTTCTTCTTCCTCTTCATCTTCAAAGCATGCTACTCACAAAGCATCCCAAACATCTTCAACTCAGGAAAAGAGTAGGAGTTGTTGCAGGAAACTTAGAAGCAGAACCTCCAAGTTGATTCAGGCTAGGGAGATAGATGGTCATCGTGTCATTGCTTCCCACAATTACAAGTGTAACTTCACTGAGGAGTTTAGGAAAATACAAGCATCACAGCCTTCGGTATGGAAGTATAAGGGAACAGATAAGATTGGTATTAGTGCTTTGAAACAGGTGCATGTCCGTGTGCAGACATTTGAGGGTGAATGTGATAGTGATATTATATTGACAGGCAGCACCAATGGCTCATTCAGTCTTTGTGAAGTTGGAAGGGATGGGGGATATTTTGATGGTGAGGTTAAGTGGACGCCCGATTGTGTGAAGAGTTATGCTAAAGGGAAAACTGATGAGAATAATGTGGTGCCTGGTCCAGTTTCAAGACCTACTGGAGGGTCCGTGGTTATGTCATCTGGTATATCTTGCATAAGATCAGGCCCAGAGTGCTCTTCTCATGCTGCAAATGGCGGTCCTATTGTTGGACATGCATTGTATCCTTTTGCTTTTTTAGTACAATTTTCTCTTCAATCTATACTTCTCAGTTCTCTACATGTGGAAGATCTTAACATGGTGAATAGGTTTACAACTTTGGGTTCAGAGACATCTGGTGGGTCAATTTATTCTCTTGGCCTTGTGGAATCATTAGATCTTGGGTCAGGTATACTGAACACATGGAGCAGACTGGATGAAGTTGCTTCTTTCAAGTGTACCATTTGGACAGCAGAATATGATTATAGTAGACATCGGGCTATAATTGGTACCAACATGGGAGCTGCATTGGTGGATTTGGCAACTGGGAGGAGATCATGGTTTTTACGATGTAAAAGTGATATCTTTGCACAGCAGATTGTTAATTCACTTCCTCTCTTTATATATAGTCTACTGACTCCCCTAATTAACAAGGGAAATCTGGTTTTATGTGGACTCAGAAATGGAGCAATTGTCGGTGTAGATTTCCGTGAGAAAAGGGAGAGAGTTTCGCGAACACTTATTGAACATAGGATACCTTATGCATCACCAAATAAGAAAGTTCGAAATTCTAGTAAAGAATGGTTCAAGCTCAGTGGAGATATAGACCCTTCTCTTACCATTAGAATGCCTTCATCTATATCCAGTTTGGTATCACTTCAGTATGATGATCAGTACTTCTTGGCAAGCTCCATGGACGGAACGATGAGGCTCTATGATCTTCGCCTGCTTCAGAGAGGTTCTGTTCAATCTTATGAAGGGCATGTGAATTCCCATTCGCGTATACAACTTGGTGTTGACCCAGCTGAGAGATTTGTTATGTCAGGTGGAGAGGATCGCAACCTACGGTCATGGAGTATCAAAACTGGCAAACTTCTTTTTGAGGAGAAATTCTGTGATTCAGTTCTCTCCAGTGTTTGCTATCAATCATGTAAAGGGTTTAAAGATGAGGATGAAAAGAACCAACACAAGCATGAATCTTGTATGGGTGCATGGCTTGGATCACATGATGAAGGACTATTTTATATGCGCTGGTTATGTGTGTGA 1716 0.4207 MPPPPPAPDLPGFYYDPEKNRYFPIKGPIPGSSRSSFSSSSSSSKHATHKASQTSSTQEKSRSCCRKLRSRTSKLIQAREIDGHRVIASHNYKCNFTEEFRKIQASQPSVWKYKGTDKIGISALKQVHVRVQTFEGECDSDIILTGSTNGSFSLCEVGRDGGYFDGEVKWTPDCVKSYAKGKTDENNVVPGPVSRPTGGSVVMSSGISCIRSGPECSSHAANGGPIVGHALYPFAFLVQFSLQSILLSSLHVEDLNMVNRFTTLGSETSGGSIYSLGLVESLDLGSGILNTWSRLDEVASFKCTIWTAEYDYSRHRAIIGTNMGAALVDLATGRRSWFLRCKSDIFAQQIVNSLPLFIYSLLTPLINKGNLVLCGLRNGAIVGVDFREKRERVSRTLIEHRIPYASPNKKVRNSSKEWFKLSGDIDPSLTIRMPSSISSLVSLQYDDQYFLASSMDGTMRLYDLRLLQRGSVQSYEGHVNSHSRIQLGVDPAERFVMSGGEDRNLRSWSIKTGKLLFEEKFCDSVLSSVCYQSCKGFKDEDEKNQHKHESCMGAWLGSHDEGLFYMRWLCV* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1121 571 ProSiteProfiles Trp-Asp (WD) repeats profile. 475 518 IPR001680 GO:0005515
Ahy14g1121 571 MobiDBLite consensus disorder prediction 31 61 - -
Ahy14g1121 571 Pfam WD domain, G-beta repeat 472 509 IPR001680 GO:0005515
Ahy14g1121 571 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 17 567 - -
Ahy14g1121 571 PANTHER KATANIN P80 SUBUNIT 17 567 - -
Ahy14g1121 571 SUPERFAMILY WD40 repeat-like 139 530 IPR036322 GO:0005515
Ahy14g1121 571 SMART WD40_4 468 509 IPR001680 GO:0005515
Ahy14g1121 571 SMART WD40_4 424 463 IPR001680 GO:0005515
Ahy14g1121 571 Gene3D - 325 535 IPR015943 GO:0005515
Ahy14g1121 571 MobiDBLite consensus disorder prediction 24 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1121 Ahy-Chr14 21112918 21118363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g1121 448 532 Miscellaneous Gene Families AT5G08390 28.235 1.65e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1121 K11799 - gmx:100798753 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1121 14 21112918 21118363 Ahy4g1026 4 20709551 20712238 hybridization