Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4484 ATGCTGAGGCACCTAATCGCTCACCTGCACCAGCTCCTTCACACATCTTCAACAACTTCCCCAACGTCTCCTTCATCTTCCTTCATCCTTCACCCTTCTTCTCTTCACAATCATCCCAGATGGTCCTTCCTTGATATTGATGATAACTCTGTAGATGACTGCTGTGGCCTTGTAATGGCAGCTGGAAAGTCTGGAAATTTGAGGATGGTGGAGCCTCTAAAACATCCATCTACAAAGAAGCCCCGAAGAGATCAGAGCAGGGGGAAATCATCTGGAAGGTCCTCTATGACTGAAGTTATGGAACAACAAATTTGGAAAGATTTTCCAGAGGATTTAATAGAGGCTGTGATTGCTCGACTTCCCATTGCCACATTTTTCCGTTTCCGTTCTGTATGCTGGCGTTGGAATTCCTTGCTGAATTCTCCAAGTTTTTCTCAGCATTGTGCACAAGTTCAACACGCAAACCCGTGGTTTTATATCGTAACCCAAGAGCGTGCAAACTCAGGAGCCATGTACGACCCTTCTATTAAAAAGTGGTATCACCCAGCCGTGTCAGCACTGCCCTCAAAGTTGATTCTTTTCCCAGTGGCGTCTGCTGGGGGGCTAGTTTGCTTTCTTGAAATTGGTCAGCGAAACTTCTTTGTTTGCAACCCATTGACTCAATCCTTCAAGGAATTACCTGCTAGGTCAGTTAAGGTCTGGTCTCCGGTTGCTGTAGGGATGACAGCAAATGGGAACTTAACTGGTGCAGGCTACAAGATCCTATGGGTTACTTGTGATGGAGAATATGAGGTTTATGACTCCATGAGGAAGTCTTGGAGCCGTCCAGGAAACATGCCTGTAGGTATTAAGCTGCCATTAGCACTCAACTTCAAGTCCCAATCTATTTCTATTGACAGCACAATTTACTTCATGCATTCGGATCCAGAAGGGATTGTTTCCTATGATATGGCAACTGGGGTTTGGAAACAGTACATAATCCCAGCCCCATTGCATCTAACTGACCACACATTGGCCGAGTGTGATGGCCGGATTATGCTTGTTGGGTTGCTCACAAAAAATGCAGCCACCTGCGTATGCATATGGGAGCTGCAGAAGATGACGCTCTTATGGAAGGAGGTAGACAGAATGCCAAATGAATGGTGCTTGGACTTATATGGGAAGCACATTAAAATGACTTGCCTGGGGAACAAAGGTTTGCTTATGTTGTCCTTGAGATCGAAACACATGAATCGATTGGTTACTTACAACATAGCAAGCAGGGAATGGCTGAAGGTTCCTGGGTGTGTGGCGCCACGTGGAAGAAAGCGGCAGTCTATAGCATGTGGTACTGCATTTCATCCATGCTTAACTGCAGTGGCTTGA 1365 0.4593 MLRHLIAHLHQLLHTSSTTSPTSPSSSFILHPSSLHNHPRWSFLDIDDNSVDDCCGLVMAAGKSGNLRMVEPLKHPSTKKPRRDQSRGKSSGRSSMTEVMEQQIWKDFPEDLIEAVIARLPIATFFRFRSVCWRWNSLLNSPSFSQHCAQVQHANPWFYIVTQERANSGAMYDPSIKKWYHPAVSALPSKLILFPVASAGGLVCFLEIGQRNFFVCNPLTQSFKELPARSVKVWSPVAVGMTANGNLTGAGYKILWVTCDGEYEVYDSMRKSWSRPGNMPVGIKLPLALNFKSQSISIDSTIYFMHSDPEGIVSYDMATGVWKQYIIPAPLHLTDHTLAECDGRIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNEWCLDLYGKHIKMTCLGNKGLLMLSLRSKHMNRLVTYNIASREWLKVPGCVAPRGRKRQSIACGTAFHPCLTAVA* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4484 454 Gene3D - 105 143 - -
Ahy13g4484 454 MobiDBLite consensus disorder prediction 73 89 - -
Ahy13g4484 454 MobiDBLite consensus disorder prediction 68 97 - -
Ahy13g4484 454 Gene3D - 144 445 IPR015915 GO:0005515
Ahy13g4484 454 PANTHER BNAA07G08860D PROTEIN 40 453 - -
Ahy13g4484 454 SMART fbox_2 108 148 IPR001810 GO:0005515
Ahy13g4484 454 SUPERFAMILY Galactose oxidase, central domain 131 435 IPR011043 -
Ahy13g4484 454 Pfam F-box domain 105 144 IPR001810 GO:0005515
Ahy13g4484 454 PANTHER F-BOX/KELCH-REPEAT PROTEIN 40 453 - -
Ahy13g4484 454 SUPERFAMILY F-box domain 103 145 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4484 Ahy-Chr13 145069579 145072706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4484 - - gmx:100795488 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4484 13 145069579 145072706 Ahy13g4484 13 145069579 145072706 ECH
Ahy13g4484 13 145069579 145072706 Ahy3g4201 3 142008981 142012263 hybridization