Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4481 ATGAGAAGAAGTGGAAGCCGGTTGTACTTATTAGTGTTGTTGGTGTTGGTGGCGGTGGAAGTGGAAGTGGAAGTGGAAGGAACGGATGCTTTGGCGGGGAAGTGCAGCACGGTGGTGCAGCAGGTGATACCGTGCCTGAACTTCGCGACGGGGCAGGCTCAGGTACCGTCGAAGGAGTGCTGTGACGCTTCGTCGAAGATCAAGGACAGCGCACCGGAGTGCCTCTGCTACGTGATCCAGCAAACCCACAAGGGCAGCCCTGAGGTGAAGAGTATGGGTATTCAAGAGGCTAGGCTCATCCAGCTCCCTTCTGCTTGCAAATTGAAGAATGCTAGCATCTCCAACTGTCCCAAGCTTCTAGGTCTATCTCCAGGCTCAGCAGACGCACAAATCTTCACCAACATCTCTTCATCGAGTAATAGTAGTACGGCTTCACCCTCAACCTCGTCCTCATCCTCATCAGCAACACCCACATCGCAGAACGATTCTCATGGAACCATGCTTAGACCTCCTCTCATGGCAGACATAACTGCGCTCATGGCCTTGCCCATGCTTCTCCTTGTGCTTCCCACTGCAACTGTCACCCTTTACTCGTAA 597 0.531 MRRSGSRLYLLVLLVLVAVEVEVEVEGTDALAGKCSTVVQQVIPCLNFATGQAQVPSKECCDASSKIKDSAPECLCYVIQQTHKGSPEVKSMGIQEARLIQLPSACKLKNASISNCPKLLGLSPGSADAQIFTNISSSSNSSTASPSTSSSSSSATPTSQNDSHGTMLRPPLMADITALMALPMLLLVLPTATVTLYS* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4481 198 Gene3D - 32 113 IPR036312 -
Ahy13g4481 198 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 34 116 IPR036312 -
Ahy13g4481 198 MobiDBLite consensus disorder prediction 137 166 - -
Ahy13g4481 198 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 181 IPR043325 -
Ahy13g4481 198 SMART aai_6 35 116 IPR016140 -
Ahy13g4481 198 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 9 181 - -
Ahy13g4481 198 CDD AAI_LTSS 44 108 - -
Ahy13g4481 198 Pfam Probable lipid transfer 17 116 IPR016140 -
Ahy13g4481 198 MobiDBLite consensus disorder prediction 137 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4481 Ahy-Chr13 145036748 145037855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4481 1 166 Acyl Lipid Metabolism Gene Families AT1G27950 43.373 6.64e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4481 - - ahf:112734859 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4481 13 145036748 145037855 Ahy13g4481 13 145036748 145037855 ECH
Ahy13g4481 13 145036748 145037855 Ahy3g4199 3 141984534 141985568 hybridization