Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4471 ATGGATTGGCAAGGACAAAAGCTAGCAGAGCAGCTGATGCAGATATTGCTGCTTGCCTTTGCTGTGGTTGCATTCACAACTGGATACTTTACGGCTTCTTTCCAATTGATGATCCTCACATATTTTGGTGGTGTGGTTCTCACTACATTGGTGACCGTCCCTAATTGGCCCTTCTACAATCGCCATCCTCTCAAGTGGTTGGACTCAAGCGAGGTAGAAAAGCATCCGAAGCCACAGCCGTCGGCAAACTCAACTTCAAAGAAGAAACCTGTTAAGAAGTAA 282 0.461 MDWQGQKLAEQLMQILLLAFAVVAFTTGYFTASFQLMILTYFGGVVLTTLVTVPNWPFYNRHPLKWLDSSEVEKHPKPQPSANSTSKKKPVKK* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4471 93 MobiDBLite consensus disorder prediction 70 93 - -
Ahy13g4471 93 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 1 70 IPR009542 GO:0005787|GO:0006465|GO:0016021
Ahy13g4471 93 PANTHER SIGNAL PEPTIDASE COMPLEX SUBUNIT 1-RELATED 1 90 - -
Ahy13g4471 93 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 1 90 IPR009542 GO:0005787|GO:0006465|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4471 Ahy-Chr13 144829678 144830152 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4471 K12946 - gmx:100526911 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4471 13 144829678 144830152 Ahy13g4471 13 144829678 144830152 ECH
Ahy13g4471 13 144829678 144830152 Ahy3g4188 3 141842194 141843893 hybridization