Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4448 ATGGCGTTGAATTTCTCGCATCGACCAATTTTTCCGGGTGGTCTGTCTGAGGATAATTTGGTTGCGCCCATGAGGATTGGGAATGGGTACCGGGTGGAAGGTATTCAGGAGAAGGGTAAGGGTGCAGGTGGTGGTGATGGTTTTGGGAATGCATCATGGCATGATGCTGATAATTGCTTTGATTATGGGAGAGAGAGGTGTGATATGGGTAACGCTCAAGATTCTGTCTCCAAGGACATTCTTGATCTTTTGCCCTCGGATCCCTTTGGAATGGACATCAGCACCACATTTACTGCTATCAAGGGGTGGCTTCAGGATTTGGAGGTTGATAATGGTGGTTACCGGATGGAGGAGCTTCGGGAAGGCAACCGTTTCCAGATGTATGCTGAGTTGGAATTTCTTTGCAACAATGCTATGTGGTTTCACACGTTAGAGCCGAGTGGATTCGGTGAGTGCTCTTTGAGAGTTGGAGCTCCATCCTGCAATTTTGCTTCTGGATCTGATTGTAGTATGGATGACAAGTTGGGTTTTGGATCTGATTATGAAGATGTGGGCATTCCTAGCTGGTCTGGTGGTGACACACACATGGATGATGGGAACTTTTTTGGTGCCGATGAACTTTCTCCTCATCCAGCTATGAGTTTTTGTCTTGGCTATCTAGGATTGTCTGATCTTCTTGTTGTTGAAAGAGTATGCAAATCTCTGCGTTCTACAGTTCGAGGCGATCCACTTTTGTGGAGAAGGATACACATAGACCAACCTTTAAATGAGAGGATTACTGATGATGTTCTTATGCAACTATCTGATAGAGCTCAGGGTAATCTTCAGTGCTTGAGCCTAGTGGAGTGCACTAGGATTACTGATGATGGTCTGAGGCGTGTTCTTGAAGCCAATCCCAAGTTAACTAAGTTGAGTGTTCCTGGATGCACAAGACTCAGTATTGAAGGTATAGTGAGTACTTTAAAAGCTTTCAAGTCTATGGGAACACAAGGGGTGAAACATTTACACATAGGTGGCCTTTATGGTGTTACACAAAACCATTTTGAAGAACTGAAGCTCTTGATGGGCACTGATAGCCAGGTGCTGCAGCATCCTCGCAAACCTCACTTTTACCGCAGGGGCAACTTATACCTGTCTTGTGATGATGACCGAGACATAGATATTGAAGTTTGTCCAAGATGCCAGAATTTAAGGCTGGTATATGATTGTCCTGCAGAGGGCTGTCAAGCAGTGGGGCATGCCCCAGAGTGTAGGGCATGCACTTTATGCATAGCCCGGTGTAGTCAGTGTGGCCATTGCATCAATGACAGCGAGTATGAAGAAACATTTTGTCTGGAACTACTTTGCTCTTCTTGTTCCAAGCTGCTAATCAAATGTTCAGAAAGGCCAGATAGAAGTGTTGGCCCAACTGAGTCAGTTGTTCCCCATGAGCACAGTTAG 1440 0.4549 MALNFSHRPIFPGGLSEDNLVAPMRIGNGYRVEGIQEKGKGAGGGDGFGNASWHDADNCFDYGRERCDMGNAQDSVSKDILDLLPSDPFGMDISTTFTAIKGWLQDLEVDNGGYRMEELREGNRFQMYAELEFLCNNAMWFHTLEPSGFGECSLRVGAPSCNFASGSDCSMDDKLGFGSDYEDVGIPSWSGGDTHMDDGNFFGADELSPHPAMSFCLGYLGLSDLLVVERVCKSLRSTVRGDPLLWRRIHIDQPLNERITDDVLMQLSDRAQGNLQCLSLVECTRITDDGLRRVLEANPKLTKLSVPGCTRLSIEGIVSTLKAFKSMGTQGVKHLHIGGLYGVTQNHFEELKLLMGTDSQVLQHPRKPHFYRRGNLYLSCDDDRDIDIEVCPRCQNLRLVYDCPAEGCQAVGHAPECRACTLCIARCSQCGHCINDSEYEETFCLELLCSSCSKLLIKCSERPDRSVGPTESVVPHEHS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4448 479 SUPERFAMILY F-box domain 209 252 IPR036047 GO:0005515
Ahy13g4448 479 SUPERFAMILY RNI-like 257 345 - -
Ahy13g4448 479 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 1 464 - -
Ahy13g4448 479 Gene3D Ribonuclease Inhibitor 224 361 IPR032675 -
Ahy13g4448 479 PANTHER F-BOX PROTEIN SKIP14 1 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4448 Ahy-Chr13 144589933 144593718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4448 - - aip:107632017 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4448 13 144589933 144593718 Ahy13g4448 13 144589933 144593718 ECH
Ahy13g4448 13 144589933 144593718 Ahy3g4166 3 141583943 141587701 hybridization