Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4073 ATGACGAGGCCAAGTTACCTAATTGTGGGAGAGAAGAAATGGGGAGATATTTTGTCATGGATTGCAATATCAACGACGCTCGTTATTGCAGTTGTGGATGGTAGAGAGTGCAGTTTTCCGGCCATATTCAACTTAGGGGACTCCAATTCAGACACGGGTGGCCTCACAGCAGCTTTTGGGCCTGCTCCGCCCCCCAATGGAATCACTTTTTTCCACTCCCCTGCCGGACGCTTCTCCGACGGTCGCCTCATCATTGATTTCATAGCTCAAAGCTTTGATTTGCCTTATCTGAGTGCTTACCTGGACTCTGTCGGCTCAAACTTCACTCACGGAGTGAATTTCGCAACCGCCGGATCCACTGTCAGACATCAGAATACCACGTTGTTTCAGAGTGGATATAGCCCCATCTCCCTTGATGTTCAGTCTGTGCAGCTCTCTGATTTCAAAGCAAGATCCAAACTGGCTCGCAAGCGAGGAAGCGTGTTTAGGGAATTGTTGCCCAAGGAGGAGTACTTTTCTGAGGCTTTATACACCTTTGACATTGGCCAAAATGATATCACTGCTGGCTACAAGCTAAATATGACCTCAGAGCAAGTGAAGGCATATGTACCTGATGTTTTGACCCAGTTCTCCAATGTCATAAGGAATGTGTATGAGGAAGGTGGAAGGTCGTTTTGGATCCACAACACAGGCCCACTCGGATGCCTACCTTACATGCTCGATCGCTATCCAATGAGTTCAGATCAAATAGACAAATCTGGATGCGCCAAACCCTTCAACCAGGTTGCACAGTATTTTAACCGCAAATTGAAAGACACGGTTATGCAGCTGAGGAAGCAGCTGCCCGAGGCAGCAATCACCTATGTTGACGTGTACAGAGTGAAGTACAGTCTCATAAGCAATGCCCAAAAATACGGTTTCAAGGATGGGGTGATAGCATGCTGTGGGCAGGGAGGGAAGTACAACTACAATAACGCTGCAAGATGTGGCGCCACCAAGGTCGAGAATGGAAAGAAGGTGCTGATCGCCAAGTCCTGCAAAGATCCAAGTGTCAGAATTATTTGGGATGGGATCCATTACACTGAAGCTGCCAATTACTGGATCTTCCAACAAATTGCCAATGGATCCTTTTCAGATCCACCCCTGCCTTTAAATATGGCTTGTGAATTTTGA 1173 0.4723 MTRPSYLIVGEKKWGDILSWIAISTTLVIAVVDGRECSFPAIFNLGDSNSDTGGLTAAFGPAPPPNGITFFHSPAGRFSDGRLIIDFIAQSFDLPYLSAYLDSVGSNFTHGVNFATAGSTVRHQNTTLFQSGYSPISLDVQSVQLSDFKARSKLARKRGSVFRELLPKEEYFSEALYTFDIGQNDITAGYKLNMTSEQVKAYVPDVLTQFSNVIRNVYEEGGRSFWIHNTGPLGCLPYMLDRYPMSSDQIDKSGCAKPFNQVAQYFNRKLKDTVMQLRKQLPEAAITYVDVYRVKYSLISNAQKYGFKDGVIACCGQGGKYNYNNAARCGATKVENGKKVLIAKSCKDPSVRIIWDGIHYTEAANYWIFQQIANGSFSDPPLPLNMACEF* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4073 390 Gene3D SGNH hydrolase 33 376 IPR036514 -
Ahy13g4073 390 SUPERFAMILY SGNH hydrolase 44 374 - -
Ahy13g4073 390 CDD SGNH_plant_lipase_like 40 376 IPR035669 -
Ahy13g4073 390 Pfam GDSL-like Lipase/Acylhydrolase 42 372 IPR001087 GO:0016788
Ahy13g4073 390 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 27 389 - -
Ahy13g4073 390 PANTHER BNAA06G32900D PROTEIN 27 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4073 Ahy-Chr13 140191198 140193699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4073 40 386 Acyl Lipid Metabolism Gene Families AT4G10950 28.412 3.31e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4073 - - gmx:100803899 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4073 13 140191198 140193699 Ahy13g4073 13 140191198 140193699 ECH
Ahy13g4073 13 140191198 140193699 Ahy3g3795 3 137343600 137345460 hybridization