Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3953 ATGTCTCTGCCACCCATAGAGTGTATTTACGTAACGGAGGACTGTGTTCGCGAATGGAAGAGTGGCAATCCTGCCCTCAGGGTTTCCGAACCAGTTCCATCGCTACGCTTCCTCTACGAGCTTTGCTGGACTATGGTTCGGGGTGAATTGCCGTTTCAGAAGTGTAAAGTAGCGTTAGATTCTGTCATATTCTCCGACAGACCGCCGACTGAGAAATTAGCTTCAAATTTTGCAGATATAGTGACCCAAATGGCCCAAGATCATACAATGTCGGGAGAGTTTCGATCTCGTCTCATTAAACTGGCAAGATGGCTTGTGGAATCTGAATTGGTTCCAGTTAGGCTACTTCAAGAACGTTGTGAGGAAGAGTTTTTGGGGGAGGCTGAAATGATCAAAATAAAGGCTCAGGATTTGAAGGGAAAAGAGGTCAGAGTTAATACACGGCTTCTTTATCAACAAACCAAATTTAACCTTCTTAGAGAAGAGAGTGAGGGCTATGCAAAGCTGGTCACTCTTCTTTGCCGAGATTCCGAAGCTCCAACTCAAAAGGCATCTGCCGCAACAATTGGCATTATTAAGTCGTTAATTGGCCATTTTGATTTGGATCCAAATCGTGTTTTTGATATTGTTCTTGAGTGTTTTGAACTTCAACCTGATAACAGTGTGTTTCTAGAGCTGATTCCTATTTTCCCCAAGTCTCATGCTTCACAGATTCTTGGATTTAAGTTTCAATATTATCAGCGCATGGATGTCAGCTGCCCTGTTCCCTTTGGGCTCTATAAGCTCACAGCGTTGCTGGTGAAACAAGATTTTATTGATATTGATAGCATATATGCACATCTACTTCCGAAGGATGAAGAAGCATTTGAGCATTATAACACTTTCTCTTCCAAGCGGCTTGATGAGGCTAACAAAATTGGAAGAATAAACCTTGCTGCTACTGGAAAAGATCTAATGGATGATGAGAAACCGGGTGACGTCGCAATAGATCTTTTTGCTGCTATAGACATGGAAACTGATGCAATTGAAGAGCGAAAGTCTGAGCTTCAAAACAGTCAAACTTTGGGGTTGCTTACCGGCTTTCTTTCGGTGGATGACTGGTATCATGCACATATGCTGTTTGGTCGTCTGTCACCACTCAATGCAGTGGAACATATCCAAATATGTGAGAGTTTGTTTAGGCTCATTGAGAGGACAATTTCTTCAGCATATGATGTTATTCGGCACGCACATCATCAAAACTCTGGATCATCCACAGGAGTTAGTACTGATCCTATGGATGTAGATAACTCCTCAAGACGAAGTTCTTTCATAGATCTTCCGAAGGAGCTTTTTCAGATGCTTGCTTGTACTGGACCCTACCTTTACCGTGACTCTATATTGTTGCAGAAGGTTTGTAGGGTGCTGAGAGGTTATTACTTTTCTGCCCTTGAGCTTGTTAGTCATGGCGACAGTGCCTTGAATTCTCAATTTCCTGGAATTGGAAATCCTCATCTACACCTGAAAGATGCAAGGCTAAGGGTGGAGGATGCTTTAGGAGCTTGCCTACTACCTTCTTTGCAACTGATTCCTGCCAATCCAGCTGTTGGCCAGGAAATTTGGGAACTAATGAGTCTCCTTCCTTATGAGGTGCGATATCGTTTATACGGTGAATGGGAGAAAGATGATGAGCGCATACCTATGCTCCTAGCAGCAAGACAAACAGCCAAGTTGGACACTAGACGCATTTTAAAACGGTTGGCAAAGGAGAATTTGAAGCAGCTAGGTCGAATGGTCGCAAAACTAGCTCATGCTAACCCTATGACTGTCCTACGAACAATTGTTCATCAGATTGAGGCATACAGAGACATGATTACTCCTGTAGTGGATGCATTTAAGTATTTGACTCAGCTAGAGTATGACATTTTGGAATATGTTGTGATTGAGCGCTTGGCACTTGGTGGACGTGATAAGCTAAAAGATGATGGTCTAAATTTGTCAGATTGGCTTCAATCACTAGCTTCATTTTGGGGTCACCTGTGTAAGAAGTACCCTTCAATGGAATTGCGAGGCCTTTTCCAGTATCTAGTGAACCAGTTAAAAAAGGGGCAAGGAATTGAGCTTGTTCTATTGCAGGAACTTATTCAACAAATGGCAAACGTCCAGTACACAGAGAACTTGACTGAGGAGCAGCTGGATGCCATGGCAGGGAGTGACACTCTTCGATATCAAGCAACTTCTTTTGGAGTAACTCGAAATAATAAGGCATTGTTAAAGTCTACTAGCAGACTTAGAGATGCATTACTTCCCAAAGATGAACCGAAGTTGGCGATCCCCCTCCTATTGCTTATTGCTCAACATCGTTCTCTGATTGTCATCAATGCAGATGCACCATACATTAAGATGGTTAGTGAGCAATTTGATAGATCCCATGGAACTCTTCTTCAATATGTGGAATTTCTTTGCAGTGCAGTTACTCCAGCATCAAATTATGCTGCACTCATTCCATCGCTTAATGACCTGGTCCACCTTTACCACCTGGACCCTGAGGTTGCTTTCTTGATATATCGCCCTGTGATGAGACTTTTCAAGTCTCAGAGGAGTCCTGATGTTTGCTGGCCGTTGGATGATAATAATGCTGCAAATGATGCATCTACAGAATCTGATCTTGTAGATCATTCTGGCAGTATGGTTCTAGATCTTGGCTCTGCTCGAAATCCTATAAGCTGGCAATATCTACTTGATACTGTTAAAACCATGCTGCCTTCAAAAGCGTGGAATAGCCTTTCTCCTGATCTTTATGCAACATTTTGGGGCCTCACACTATATGATTTGTACGTTCCAAAAAGTCGCTACGAGTCTGAAATAGCCAAGCTGCATGCTAGTCTTAAGTCTTTGGAGGAGCTGTCTGACAATTCAAGCTCAGCAATCACCAAGAGGAAGAAGGAAAAGGAAAGAATTCAAGAATCACTTGACCGTCTGATTAGTGAACTTCATAAACATGAAGAGAATGTTGCATCAGTTCATAGGCGGCTTTCTCACGAAAAGGACAAATGGTTAAGTTCCTGTCCTGACACTTTGAAGATCAATATGGAGTTTCTTCAGCGTTGTATATTTCCACGCTGCACATTCAGTATGCCAGATGCTGTTTATTGTGCTATGTTTGTGCACACACTTCATTCGCTCGGAACCCCCTTTTTCAATACCGTCAACCATATAGATGTCCTGATTTGTAAGACTCTACAACCTATGATATGTTGCTGCACAGAATATGAGGCAGGCAGGCTTGGTAGGTTTCTGTATGAGACTTTGAAGATTGCTTACTATTGGAAGAGTGATGAATCTATTTATGAACGTGAGTGTGGAAACATGCCTGGCTTTGCTGTTTATTATAGATATCCAAACAGCCAGCGAGTTACATATGGCCAGTTTATCAAGGTACACTGGAAGTGGAGTCAGAGAATAACCAGACTATTAATTCAGTGTTTGGAATCTAGTGAGTACATGGAAATTAGAAATTCTCTCATTATGTTGACAAAGATTTCTGGAGTTTTCCCTGTTACTCGGAAGAGTGGGATAAACCTTGAAAAACGGGTGGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGCTGGCAACTGGTGTTGCTGCTGCATTAGCTGCTAGGAAGCCTTCATGGGTTACTGATGAAGAATTCGGTATGGGATATCTTGAGTTGAAGCCTGCGCCATCTATTAGTAAATCTTCTGCTGGAAATTCAGCATCTGTACAAAGTGGGATAAGTCTTGGTGTTTCTCAAACTGAATCTGGCAGTGGAAAACATCTGGACTCAGTAAACACAGTCAAAGACCAGACAAAAATAAAAACTGCAGACAGCAAGGTAGAAAGAACTGACAGCACAATAGCTGGAAAATCTGATTCTGGCCAAGCAAAACTCAAGGGTAATTCATCATTAAATGGATTGGATGCTCCATCAACCTTACCCTCACCTGCTGTACAATCTGGAGCAACAAAATCCATGGAAAACCAAAAGCAAGCAGAAGAATCTTCAAGAGCTTCCGGGAAACGTTCGGCACCTGCTAGCTCACACTCAAAGCCCTCGAAACAAGATCCTGCAAAAGAGGATACTAGATCTGGTAAAGCTGTTGCCAGAGCGTCTGGTTCTTTGAGCAGTGACAAGGATATACAAAACCATGCATCAGAGGGAAGACACACTGGAAGTACTAATTTATCTTCTTCAGTCAATGCTAATGGTAACAGTATTTCAGCTTCTGCAAAAATCTCAGCTCCATCTACTAAGGGTGAGACCGGTAGTGAGCTCAAGGCTGAGATGGGTGGCGTAAAGTCTTCTGATATTAGGGCTTCTGTGGTGAAGGATGATGGAAATGATGTTATTGACTCGGTAAGAGGTTCCTCTTCACGTGTAGTTCATTCTCCTAGGCATGACAATACAATTGTTACTTCAAAGTCTACTGATAAAGCCCAGAAGAGAGCTAGTTCTGCTGAAGAACCTGATAGACTTGGTAAACGGCGTAAAGCGGAGGCGGAGCAAAGAGATGTCGAGAATGAAATCAGATTATCTGAAAGAGAGAAGCTTGTAGATCCTCGATTATCTGATGAGAAATTGGGGCCGGAAGAACTTGGTTTGTACAGGGCAGGGGATAAGCCATTGGAAAGGGCAAAAGACAAAGGAAATGAAAGGTATGAAAGAGAGCACAGGGAGAGATTGGACCGTGTGGATAAGTCTCGTGGAGATGACTTCATTGTGGAGAAACCTAGGGATAGGTCAATCGAAAGATATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAAAGGGGTAGTGAAAGGGGTTTCAATAGACTCCCTGAGAAGGCTAAGGATGATAGAAGCAAGGATGATAGAAGTAAATTACGATACAATGATGTATCTATAGAAAAATCTCATGCAGATGATCGCTTCCATGGGCAAAGCCTGCCTCCACCACCCCCATTACCTCCAAATATGGTTCCTCAATCTGTTGGTGGTGGTAGGCGTGATGAAGATGCTGATAGGAGGTACGGAGCCACTAGACATTCTCAAAGGCTTTCTCCAAGGCATGAAGAAAAAGAACGGAGACGGTCTGAAGAGGCTGTGGTTTCCCAGGATGATGCAAAACGCAGAAAAGAAGATGATTTTCGAGATAGGAAACGCGAGGAACGAGAAGCATTATCATTGAAGGTTGAAGAGAGGGATAGAGAGAGAGAGCGGGATAGAGAAAAAACAAATCTTCTAAAGGAAGAGTTGGATTTAAATGCTGCATCCAAGAGACGTAAGCTCAAGAGGGAGCATCTGCCAGCTGGTGAACCTGGGGAGTACTCACCAGTGGCTCCTCCACCTCCACCCCTAGGAATTGGTGTTTCACAAGCTTATGATGGAAGAGACAGGGTAGACAGGAAGGGACCCATGATCCAACATGCAAATTACATAGATGAACCAGGTCTCAGAATTCATGGTAAAGAGGTAGCCAGCAAGCTGAATCGTCGTGATTCTGATCCAATGTATGATCGAGAATGGGATGATGAGAAGAGGCAAAGAGCTGATCAGAAACGGCGGCACCGAAAATAA 5589 0.4301 MSLPPIECIYVTEDCVREWKSGNPALRVSEPVPSLRFLYELCWTMVRGELPFQKCKVALDSVIFSDRPPTEKLASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESELVPVRLLQERCEEEFLGEAEMIKIKAQDLKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKASAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDNSVFLELIPIFPKSHASQILGFKFQYYQRMDVSCPVPFGLYKLTALLVKQDFIDIDSIYAHLLPKDEEAFEHYNTFSSKRLDEANKIGRINLAATGKDLMDDEKPGDVAIDLFAAIDMETDAIEERKSELQNSQTLGLLTGFLSVDDWYHAHMLFGRLSPLNAVEHIQICESLFRLIERTISSAYDVIRHAHHQNSGSSTGVSTDPMDVDNSSRRSSFIDLPKELFQMLACTGPYLYRDSILLQKVCRVLRGYYFSALELVSHGDSALNSQFPGIGNPHLHLKDARLRVEDALGACLLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSDTLRYQATSFGVTRNNKALLKSTSRLRDALLPKDEPKLAIPLLLLIAQHRSLIVINADAPYIKMVSEQFDRSHGTLLQYVEFLCSAVTPASNYAALIPSLNDLVHLYHLDPEVAFLIYRPVMRLFKSQRSPDVCWPLDDNNAANDASTESDLVDHSGSMVLDLGSARNPISWQYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKSRYESEIAKLHASLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVHRRLSHEKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNSLIMLTKISGVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSISKSSAGNSASVQSGISLGVSQTESGSGKHLDSVNTVKDQTKIKTADSKVERTDSTIAGKSDSGQAKLKGNSSLNGLDAPSTLPSPAVQSGATKSMENQKQAEESSRASGKRSAPASSHSKPSKQDPAKEDTRSGKAVARASGSLSSDKDIQNHASEGRHTGSTNLSSSVNANGNSISASAKISAPSTKGETGSELKAEMGGVKSSDIRASVVKDDGNDVIDSVRGSSSRVVHSPRHDNTIVTSKSTDKAQKRASSAEEPDRLGKRRKAEAEQRDVENEIRLSEREKLVDPRLSDEKLGPEELGLYRAGDKPLERAKDKGNERYEREHRERLDRVDKSRGDDFIVEKPRDRSIERYGRERSVERMQERGSERGFNRLPEKAKDDRSKDDRSKLRYNDVSIEKSHADDRFHGQSLPPPPPLPPNMVPQSVGGGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEEAVVSQDDAKRRKEDDFRDRKREEREALSLKVEERDRERERDREKTNLLKEELDLNAASKRRKLKREHLPAGEPGEYSPVAPPPPPLGIGVSQAYDGRDRVDRKGPMIQHANYIDEPGLRIHGKEVASKLNRRDSDPMYDREWDDEKRQRADQKRRHRK* 1863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3953 1862 Coils Coil 942 962 - -
Ahy13g3953 1862 Coils Coil 1505 1525 - -
Ahy13g3953 1862 MobiDBLite consensus disorder prediction 1378 1430 - -
Ahy13g3953 1862 Pfam Transcription factor/nuclear export subunit protein 2 919 1213 IPR021418 -
Ahy13g3953 1862 MobiDBLite consensus disorder prediction 1283 1796 - -
Ahy13g3953 1862 PANTHER THO2 PROTEIN 11 1769 IPR040007 GO:0000347|GO:0006397|GO:0006406
Ahy13g3953 1862 Pfam Transcription- and export-related complex subunit 592 667 IPR021726 -
Ahy13g3953 1862 MobiDBLite consensus disorder prediction 1490 1648 - -
Ahy13g3953 1862 MobiDBLite consensus disorder prediction 1461 1489 - -
Ahy13g3953 1862 Coils Coil 970 1004 - -
Ahy13g3953 1862 MobiDBLite consensus disorder prediction 1828 1862 - -
Ahy13g3953 1862 Coils Coil 1721 1741 - -
Ahy13g3953 1862 Pfam THO complex subunit 2 N-terminus 436 590 IPR032302 -
Ahy13g3953 1862 Pfam THO complex subunit 2 N-terminus 37 417 IPR032302 -
Ahy13g3953 1862 MobiDBLite consensus disorder prediction 1296 1338 - -
Ahy13g3953 1862 MobiDBLite consensus disorder prediction 1671 1775 - -
Ahy13g3953 1862 PANTHER THO COMPLEX SUBUNIT 2 11 1769 - -
Ahy13g3953 1862 MobiDBLite consensus disorder prediction 1828 1854 - -
Ahy13g3953 1862 MobiDBLite consensus disorder prediction 1347 1361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3953 Ahy-Chr13 138880485 138897117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3953 K12879 - gmx:100817413 3074.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3953 13 138880485 138897117 Ahy13g3953 13 138880485 138897117 ECH
Ahy13g3953 13 138880485 138897117 Ahy3g3679 3 136095108 136111627 hybridization