Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3861 ATGGACCAATCCACTACCTCCTCTTTCTGCAACTTAGGGATTCTCGATTCCCTCTCCAACGATTCCATATGCGAAATCCTCCGCTCCTACAATGGTTTCTGTGCCGCCACCCAAACCCTCCTCGCCGCCGTGGACGACCTATCCGCCCGCCGCGACTTCGTTGCCCATGTTCACTCCCTCTGCAAACATGGCCTCGATTCCCTCGTCCGAGACCACTTTCTTCGCGTTTTGGAGGAAACGTTTGAGAGAAATGGGGCGTCGAGGTTTTGGCGCCATTTTGAGCCTTACAGTAATGTTACGGGTTTGAACAAGAATGATGATCTTGAGATTGATGAGGACGAGATTCTGAGTGTGTTGCATAGTGCTTTGGAAGAAATCTATTTGGAGAAAGGGTATCAGGAGAAGTGCTTGTTAATGTTGGTCCATGCTTTCCAATCATACAAGAAGCAGGTGTCGGGGGACACTCATGATCTTGATGCAGAGAGGAATCACCTTACCACTAAATATCAATGGATTGTCTCCTCTGTACTTACGGCTACGCTTCCTAGGAATTTCCGTGTTATACTGCATTGGTATTTTAAAAGAACATTGGAGGAGTTAAGTACAAGGATGGATGAGGAGTTGCAAGATCATGAATCTCAAAGCAAGGATGGCATGGATTTAGACGAAAAAGGAAAAATAAGCAACAAGGTTGGCGAAATGGATGTTGATGAATGCTATAATGACAGCAGATTTGCTTTCACCATTTTGCTGAATTTGTTTCATTTGTTTGGACGGCAGGCAAAAGTATATGATTTAGCTGGTGATGATTTTAGGAGTTCTGTTCTACAGTCTATTCAAAGCTGGATACAGGCTGTACCTCTCAAGTTTCTGCATGCCCTTCTTGTCTATCTTGGAGATTCTGTTAGTTATGAGAGTTCTTCTTCAGGTCTCAAATCACCTTTAGCATCACAACCATCCTCATTCTGTCCTGGAATCGATTCTCCTTCTGAAGGGCTTGTTAGATGGAAGCTGCGGCTGGAATATTTTGCTTATGAAACACTGCAAGATTTAAGAATTTCCAAATTATTTGAGATTATCGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTCGACTCATTTATTTCTTCACTTCGTTATCGCTTGCTCACTGCAGGCGCATCAACCAATGATATATTGCACCAATATGTTTCAACCATTAAAGCCCTGAGGACAATAGACCCTGCAGGTGTTTTCCTTGAGGCTGTTGGTGAACCAATAAGGGATTATTTAAGAGGAAGGAGAGATACCATAAAATGCATAGTGACCATGTTGACAGATGGGACTGGTGGGAATTCTAGTGCATCTGGAAATCCTGGAGATAGCCTTCTTGAAGAGCTGAACAGAGATGAAGAAATTCAAGAGGATGTTGGTATTGACGATGATTTTAACACTGATGATAGGCAAGCATGGATTAATGCTGCACGCTGGCAGCCTGACCCTGTGGAAGCAGATCCACTAAAAGGAAGCAGAAACCAAAGGAAAGTTGACATACTTGGAATGATTGTTGGCATTATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCTGAGAAACTTCTAAATAAATCTGATTATGATATTGACTCAGAGATTCGGACTTTAGAACTCCTCAAGATACACTTTGGAGAGAGTAGCCTACAAAAATGTGAGATTATGCTCAATGATTTACTTGGCTCAAAGAGAACTAATACAAACATCAAAGCTACCATAAGTCAACCATCTCAGACAAGTGGAGAAAATGCAATATCCATGGATACGATTTCTGCCACTATCATATCTTCTAATTTTTGGCCTCCAATACAGGATGAGCCGGTTAACCTGCCAGAATCTGTCGACCAGCTCCTTACTGAGTATGCAACGAGATTTCATGAAACAAAAACCCCTCGTAAGCTACAGTGGAAAAAAAGTCTTGGGACTGTCAAGTTGGAGTTGCAGTTTGATGATAGGATAATGCAGTTCACAGTGGCCCCTGTACATGCATCAATCATTATGCAATTTCAAGATCAAAAGAGTTGGACTTCTAAAAACCTTGCGGCTGCTATTGGAATCCCAGTGGATGCACTGAGTAGGAGAATACATTTTTGGATAAGCAAGGGGATCATTTCAGAGTCGGCTGGGGTAGATACCTCAGATCATGTATACACCATTATGGAAAGCATGGCTGAGACAAGTAAGAATGGAGCTGGTAGTAGTGGTATCCAGGAACTTCTAGGGGGCGATGAGGAAGAAGAAAGATCCGTCTCCTCTGTGGAGAATCAACTTCTTAAGGAGATGACTGTATATGAGAAATTTATCATGGGCATGCTCACAAACTTTGGTAGCATGGCACTAGATCGAATTCACAATACACTCAAGATGTTTTGTATTGCTGATCCCCCATATGACAAGTCACTCCAACAGTTACAAAGCTTTTTATCAGGTCTAGTCTCTGAGGAGAAATTAGAGCTTAGGGATGGAATGTACTTTCTAAAGAAGTAA 2580 0.4202 MDQSTTSSFCNLGILDSLSNDSICEILRSYNGFCAATQTLLAAVDDLSARRDFVAHVHSLCKHGLDSLVRDHFLRVLEETFERNGASRFWRHFEPYSNVTGLNKNDDLEIDEDEILSVLHSALEEIYLEKGYQEKCLLMLVHAFQSYKKQVSGDTHDLDAERNHLTTKYQWIVSSVLTATLPRNFRVILHWYFKRTLEELSTRMDEELQDHESQSKDGMDLDEKGKISNKVGEMDVDECYNDSRFAFTILLNLFHLFGRQAKVYDLAGDDFRSSVLQSIQSWIQAVPLKFLHALLVYLGDSVSYESSSSGLKSPLASQPSSFCPGIDSPSEGLVRWKLRLEYFAYETLQDLRISKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVDSFISSLRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMLTDGTGGNSSASGNPGDSLLEELNRDEEIQEDVGIDDDFNTDDRQAWINAARWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLLGSKRTNTNIKATISQPSQTSGENAISMDTISATIISSNFWPPIQDEPVNLPESVDQLLTEYATRFHETKTPRKLQWKKSLGTVKLELQFDDRIMQFTVAPVHASIIMQFQDQKSWTSKNLAAAIGIPVDALSRRIHFWISKGIISESAGVDTSDHVYTIMESMAETSKNGAGSSGIQELLGGDEEEERSVSSVENQLLKEMTVYEKFIMGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3861 859 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 15 859 IPR044554 -
Ahy13g3861 859 ProSiteProfiles Cullin family profile. 530 730 IPR016158 -
Ahy13g3861 859 Pfam Cullin family 524 727 IPR001373 GO:0006511|GO:0031625
Ahy13g3861 859 SMART APC2_2 798 857 IPR014786 -
Ahy13g3861 859 Pfam Anaphase promoting complex (APC) subunit 2 798 855 IPR014786 -
Ahy13g3861 859 Gene3D Cullin Repeats 508 606 - -
Ahy13g3861 859 Gene3D Cullin; Chain C, Domain 2 619 759 - -
Ahy13g3861 859 SUPERFAMILY Cullin homology domain 505 738 IPR036317 -
Ahy13g3861 859 PANTHER BNAC04G32030D PROTEIN 15 859 - -
Ahy13g3861 859 Gene3D - 774 859 IPR036388 -
Ahy13g3861 859 MobiDBLite consensus disorder prediction 759 778 - -
Ahy13g3861 859 SUPERFAMILY "Winged helix" DNA-binding domain 788 858 IPR036390 -
Ahy13g3861 859 Coils Coil 194 217 - -
Ahy13g3861 859 SMART cul_2 526 680 IPR016158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3861 Ahy-Chr13 138041823 138049974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3861 K03349 - gmx:100785428 1350.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3861 13 138041823 138049974 Ahy13g3861 13 138041823 138049974 ECH