Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3850 ATGAAGAAGTGGTATGGCAGGATTGTGATGGCATCATTGTTCATGTTGTTCATGGTTCTGCTCCTTAGATACAGTTTCATGAAATACCCTAACGGGGCAACATATCTCACTCTAGTTCCTGTTTCTTTGAACAACAAAACTGATCCTATAAAGTGGATTGATCCTATGGTTTCACCTGTTCAGAGTCCAAACAATGATTCTCAAGTTGTTCCTTCAGACATTGTAGTATCTAGCCTGTTTTCCATGAACAATTTCACCAAACAAGAGCAACAAACTATGCAGACATGGAACAAGTTAAAACACTTGCTTGATCATACTAAGGGATTGCCTAATGCTGTGGAAGCTGTTAAAGAAGCTAAAGGCGCATGGAATAGTCTTGTTTGCTTAATAGAAGAACAAAGGGAAGGTTATAGGAATGAGAGTTTAAGATTGAAGGAGAAACAATGTCCCTATTTTCTTAACAATATGAATTCCACAGAACTTGGTAGTGGTAGTTACAAGCTGAGGTTTCCATGTGGCCTCACACAAGGTTCTTCCATATCTGTTATTGGTGTTCCCAAAGGGCTACTAGGCGATTTTCGGATTGACTTGACTGGAGAACCCCTTGCCGGAGAACCTGATCCTCCAATTGTTTTGCATTACAATGTTAGGCTCCATGGCGATAAGATCACCCAAGATCCTGTGATTGTTCAGAATACTTGGACAAAAGATCAAGATTGGGGTGCAGAGGAACGTTGCCCTTCTCTTGCTCCTGAAAATGCTAAGAAAGTTGATGAGTTGGAGCAGTGCAATAAGATTGTGGGAAAGAACATGGAGGGAAATGGCATGCAGTCCCACACTTCTAGGAAACTTTCAGCACCAAAAGAGGAACAATTGAAAAACAGAAAATATTTTCCTTTTAAGCAAGGCGATCCATTTGTTGCAACTATTAGAGTTGGATCAGAGGGAATCCAAATGACTGTTGATGGAAAACACATAACTTCATTCGCTTTTCGCCAAACTTTGGAGGCATGGCTTGTGAGTGAGATGAGAATTTCAGGAGATGTTGAGTTAATTTCTGTCCTTGCCAGTGGTCTTCCTACATCAGAGGATTCAGAGCATATTGCTGATATAGAATCACTGAAATCTACTCCTATATCTGCCAATACCCCATTGGATCTCTTCATTGGTGTTTTCTCTACAGCTAACAATTTCGAGCGTAGGATGGCTGTTAGAAGAACATGGATGCAGTACAATGCAATTCGATCCAATCAAACTGCGGCCGTGCGCTTCTTCGTTGGTTTGCATAAGAACCAAATTGTAAATGAAGAATTGTGGAAAGAATCACAAACCTATGGTGACATTCAGCTAATGCCATTTGTTGACTACTATAGCATCATCTCATGGAAAACTTTAGCAATCTGCATTTTTGGGACAGAGATTGTTTCAGCAAGGTTTGTGATGAAGACAGACGATGATTCATTCGTTCGTGTGGATCAAGTTCTGGACACTTTGTATCGGATCAATGTGGATCATGGCTTGCTGTACGGACTCATCAATTCAGATTCTCGACCTCATCGAAGTGCTGATAGTAAATGGTACATCAGCCGGGAGGAATGGAGTGATGAAACATATCCTCCATGGGCACACGGTCCAGGGTATGTGGTCTCACATGACATAGCAAGCATGGTGTACAAGAAATACACGCAAGGCCAATTGAAGATGTTCAAACTAGAAGACGTGGCAATGGGAATATGGATATCAGAGATGAAGAAGGGAGGGCTACAAGTTCGGTACGAGAAAGAAAGCAGAGTCTATAATGTGGGTTGCAAGGATGGCTACGTGGTTGCACATTACCAAGATCCTAGGCAGATGCTTTGTTTGTGGCAGAAACTTGAGCTTCGTCAAGGTCCAAAATGCTGTGCTAATCGTAGAAGAAGATGA 1923 0.4165 MKKWYGRIVMASLFMLFMVLLLRYSFMKYPNGATYLTLVPVSLNNKTDPIKWIDPMVSPVQSPNNDSQVVPSDIVVSSLFSMNNFTKQEQQTMQTWNKLKHLLDHTKGLPNAVEAVKEAKGAWNSLVCLIEEQREGYRNESLRLKEKQCPYFLNNMNSTELGSGSYKLRFPCGLTQGSSISVIGVPKGLLGDFRIDLTGEPLAGEPDPPIVLHYNVRLHGDKITQDPVIVQNTWTKDQDWGAEERCPSLAPENAKKVDELEQCNKIVGKNMEGNGMQSHTSRKLSAPKEEQLKNRKYFPFKQGDPFVATIRVGSEGIQMTVDGKHITSFAFRQTLEAWLVSEMRISGDVELISVLASGLPTSEDSEHIADIESLKSTPISANTPLDLFIGVFSTANNFERRMAVRRTWMQYNAIRSNQTAAVRFFVGLHKNQIVNEELWKESQTYGDIQLMPFVDYYSIISWKTLAICIFGTEIVSARFVMKTDDDSFVRVDQVLDTLYRINVDHGLLYGLINSDSRPHRSADSKWYISREEWSDETYPPWAHGPGYVVSHDIASMVYKKYTQGQLKMFKLEDVAMGIWISEMKKGGLQVRYEKESRVYNVGCKDGYVVAHYQDPRQMLCLWQKLELRQGPKCCANRRRR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3850 640 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 66 628 IPR002659 GO:0006486|GO:0016020|GO:0016758
Ahy13g3850 640 PANTHER - 66 628 - -
Ahy13g3850 640 Pfam Galactosyltransferase 399 584 IPR002659 GO:0006486|GO:0016020|GO:0016758
Ahy13g3850 640 SMART Gal_bind_lectin_2 170 356 IPR001079 GO:0030246
Ahy13g3850 640 Pfam Galactoside-binding lectin 166 355 IPR001079 GO:0030246
Ahy13g3850 640 Gene3D - 377 618 - -
Ahy13g3850 640 Gene3D - 162 355 - -
Ahy13g3850 640 SMART galectin_3 164 357 IPR001079 GO:0030246
Ahy13g3850 640 SUPERFAMILY Concanavalin A-like lectins/glucanases 166 357 IPR013320 -
Ahy13g3850 640 CDD GLECT 166 354 IPR001079 GO:0030246
Ahy13g3850 640 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 166 357 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3850 Ahy-Chr13 137861428 137865499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3850 1 634 Glycosyltransferase AT1G26810 58.540 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3850 K14413 - gmx:100780913 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3850 13 137861428 137865499 Ahy13g3850 13 137861428 137865499 ECH