Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3705 ATGGCACTAATTTGGCAACTCAACCTTCTCTTCTCACCTCTCATAATAATATGCTTATTATCAAACGTGGTTTCTTCACGCACTAGGCCCTTCACAGCTCCAACTGTGACACCCTTGACTAATTCCTTCCCTCGTGTCCCAATTGATCCTGCTTTTTCTAATGCTTTTGGGGCCTCCAATGTCAAGCTCCTTGCTAATGGGACCATGGCCACTCTGGCTCTCGACAAACTCTCAGGCTCCGGATTGGTGTCCAAAAGCAGTTACTACTATGGATTCTTCAGTGCTGCAATCAAATTACCAGCTGGTATATCATCTGGAGTTGTAGTTGCCTTCTATTTGTCTAATGCAGATAAATTCCCTCATAACCATGATGAGATTGATATCGAACTCCTTGGGCATGACAAGAGGAACGATTGGGTTATCCAAACAAATGTGTATGCCAATGGAAGCGTGAGCACTGGAAGAGAAGAAAAGTTCTACTTCTGGTTCGACCCAACAAAGCAGTACCATTACTATAGCATCTTGTGGAACAGTTATCATACAGTGTTCCTAGTGGACAACATTCCAGTGAGGGAATTCATACACGGGACTGTTTTCCCATCAAAACCGATGTCGGTGTATGCAACAATATGGGATGGTTCAGAATGGGCCACACATGGTGGAAAATACCCAGTTGATTATAAGTATGCACCATTTGTTGTTTCATTCTCAGAGATGCAACTCACTGGCTGCACTTCTGATCCATTAGCATGCTCTAAATCCACCCCTTCTTCTGGTGTAGACCCTGTTAATGGACCTCAATTTACCAAGCTATCCCCACAACAGCTGGCAGCACTTGATTGGGCTAGAAAGAAGCTCATGTTTTACTCCTATTGTACTGACAAGAACAGATATAAAGTCATGCCACCAGAATGCCACTAA 921 0.4365 MALIWQLNLLFSPLIIICLLSNVVSSRTRPFTAPTVTPLTNSFPRVPIDPAFSNAFGASNVKLLANGTMATLALDKLSGSGLVSKSSYYYGFFSAAIKLPAGISSGVVVAFYLSNADKFPHNHDEIDIELLGHDKRNDWVIQTNVYANGSVSTGREEKFYFWFDPTKQYHYYSILWNSYHTVFLVDNIPVREFIHGTVFPSKPMSVYATIWDGSEWATHGGKYPVDYKYAPFVVSFSEMQLTGCTSDPLACSKSTPSSGVDPVNGPQFTKLSPQQLAALDWARKKLMFYSYCTDKNRYKVMPPECH* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3705 306 CDD GH16_XET 52 305 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy13g3705 306 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 41 236 IPR000757 GO:0004553|GO:0005975
Ahy13g3705 306 PIRSF EndGlu_transf 13 306 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy13g3705 306 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED 1 306 - -
Ahy13g3705 306 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 1 306 IPR044791 GO:0004553
Ahy13g3705 306 Pfam Glycosyl hydrolases family 16 56 228 IPR000757 GO:0004553|GO:0005975
Ahy13g3705 306 Gene3D - 33 305 - -
Ahy13g3705 306 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 269 305 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Ahy13g3705 306 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 305 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3705 Ahy-Chr13 135817614 135820072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3705 1 306 Glycoside Hydrolase AT1G10550 59.937 7.94e-139 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3705 K08235 - gmx:100778993 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3705 13 135817614 135820072 Ahy13g3705 13 135817614 135820072 ECH