Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3683 ATGGAGGATGTTGCAGTTGCACACAATGTTCTATCACTCCTCTCTTCTCCTCACAGGGACTTTCTTATTCGCAACAACGCTGATCAGGTTAAAATTGAGAGCTTGAAGGGAAAGAACATTGGTTTGTATTTTTCAGCATCATGGTGTGGTCCATGTAGAAGGTTCACCCCAACTTTGGTGGAGGTGTACGATGAGACAGTTTCCAAAGGTGAATTTGAGATCGTTTTTGTATCTTCTGATAGAGATGAAGATTCCTTCAACGGTTACTTTTCCAAGATGCCATGGCTTGCTATTCCCTTCTCGGATTCCGAGACCATTAGTAGCCTCAAGAAGCTGTTTCAAGTGAGGGGGATTCCCAGTCTTGTTCTGCTTGATGAAGCTGGTAAACTTGTCACTAAAACTGGGGTTATGCTTATCAATGAACATGGGGCTGAAGCATACCCTTTTACGTCACAAAGGATCCATGAGCTCAAGGATCAAGAACAGGAAGCCAGGAGGAACCAGACCTTAACATCAATTTTGGTCTCTCGCTCTCGTGATTTTCTCATATCTTCTGATGGGAAAAAAGTACTTGTATCTGAGCTTGAGGGCAAGATAGTTGGTCTGTATTTCTACTCTGTTGTATACAATGCATCGGCAAATTTTACTCCAAAGCTATTGGAGGTATACAAGAAGCTGAGGGAAAAGGGTGAGAAGTTTGAGGTTGTGGGAATACCCTTAGATAGTGATGAAGAATCATTCAAGAAAGGACTTGAAAGTGTGGCTTGGCTATCCTTGCCTTTCAATGACAAGAGCATTGATAAGTTGGCAAGGTACTTTGAGCTCTCAGCTCTCCCAACTTTGGTTATTATTGGAGAAGATGGCAAAACTCTTCATTCCAATGTTGCTGAGGTTGTTGAGGAGCATGGTATTGCTGCATACCCTTTCACTCCTGACAAGTTTGCTGAGCTCAGTGAGATCGACAAGGCCAAGGAGGCGTCTCAAACACTCGAGTCAATTTTGGTGTCTGGAGAACAAGATTTTGTCATAGCAAAAGATGGGGTGAAGGTTCCGGTTTCAGAGCTAGTAGGAAAGACCATCCTCTTATACTTCTCAGCCCATTGGTGTCCTCCATGCCGCGCATTCCTTCCAAAACTCATTGATGCATACCAGAAGATTAAGGAAAAGGACAATAGTGCATTAGAGGTAATTTTCATCTCAAGTGACCGGGACCAAGACTCCTTTGAGGCATTCTTTGGAGGAATGCCATGGTTGGCGCTTCCCTTTGGAGACTCAAGAAAGGCTTTCTTGAGCCGCAAGTTTAAGGTATCCGGCATCCCAAAGCTTGTGGCCATTGGATCAAGCGGCAGGACCGTCACAAAAGAGGCCAGGGATCTCGTTGACCTTCACGGCGCAGATGCTTATCCTTTCACTGAGGAGAGGATTAAGGAGTTAGAGACAGCAGAGGAAGAGATTGCAAAAGGGTGGCCTCAGAAGTTGAAGCATGAATCACATGAGCATGAGCTTGTGCTCACGCGCCGCAGGATATATAACTGCGATGGTTGTGATGGCCAGGGCCGTGTTTGGTCCTTCTATTGTGCCGAATGCGACTTTGATCTGCATCCAAAGTGTGCATTGGAGAACAAAGAAAGCAAACATGATGAGGCCAACGATGAAGACAAGTCTAAACATGGTTGGGTTTGTGATGGACAAGTTTGCACTAAAGCTTGA 1710 0.4491 MEDVAVAHNVLSLLSSPHRDFLIRNNADQVKIESLKGKNIGLYFSASWCGPCRRFTPTLVEVYDETVSKGEFEIVFVSSDRDEDSFNGYFSKMPWLAIPFSDSETISSLKKLFQVRGIPSLVLLDEAGKLVTKTGVMLINEHGAEAYPFTSQRIHELKDQEQEARRNQTLTSILVSRSRDFLISSDGKKVLVSELEGKIVGLYFYSVVYNASANFTPKLLEVYKKLREKGEKFEVVGIPLDSDEESFKKGLESVAWLSLPFNDKSIDKLARYFELSALPTLVIIGEDGKTLHSNVAEVVEEHGIAAYPFTPDKFAELSEIDKAKEASQTLESILVSGEQDFVIAKDGVKVPVSELVGKTILLYFSAHWCPPCRAFLPKLIDAYQKIKEKDNSALEVIFISSDRDQDSFEAFFGGMPWLALPFGDSRKAFLSRKFKVSGIPKLVAIGSSGRTVTKEARDLVDLHGADAYPFTEERIKELETAEEEIAKGWPQKLKHESHEHELVLTRRRIYNCDGCDGQGRVWSFYCAECDFDLHPKCALENKESKHDEANDEDKSKHGWVCDGQVCTKA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3683 569 Pfam C1 domain 497 538 IPR004146 -
Ahy13g3683 569 ProSiteProfiles Thioredoxin domain profile. 317 480 IPR013766 -
Ahy13g3683 569 SUPERFAMILY Cysteine-rich domain 489 541 IPR046349 -
Ahy13g3683 569 PANTHER NUCLEOREDOXIN 1-2-RELATED 6 539 - -
Ahy13g3683 569 Pfam Thioredoxin-like 197 289 IPR012336 -
Ahy13g3683 569 Pfam Thioredoxin-like 38 129 IPR012336 -
Ahy13g3683 569 Pfam Thioredoxin-like 357 450 IPR012336 -
Ahy13g3683 569 ProSiteProfiles Thioredoxin domain profile. 12 159 IPR013766 -
Ahy13g3683 569 PANTHER THIOREDOXIN 6 539 - -
Ahy13g3683 569 CDD TryX_like_TryX_NRX 340 470 IPR045870 GO:0004791
Ahy13g3683 569 ProSitePatterns Thioredoxin family active site. 361 379 IPR017937 -
Ahy13g3683 569 SUPERFAMILY Thioredoxin-like 23 132 IPR036249 -
Ahy13g3683 569 CDD TryX_like_TryX_NRX 20 149 IPR045870 GO:0004791
Ahy13g3683 569 Gene3D Glutaredoxin 333 471 - -
Ahy13g3683 569 Gene3D Glutaredoxin 14 151 - -
Ahy13g3683 569 Gene3D Glutaredoxin 173 310 - -
Ahy13g3683 569 SUPERFAMILY Thioredoxin-like 344 453 IPR036249 -
Ahy13g3683 569 SUPERFAMILY Thioredoxin-like 182 293 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3683 Ahy-Chr13 135520777 135522955 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3683 K17609 - gmx:100809224 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3683 13 135520777 135522955 Ahy13g3683 13 135520777 135522955 ECH