Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3682 ATGGCAGATTCTGAAGATGATGCCCCCGACGAATTCCAAGACCTCTTCTCTTCTCCTGACAGGGACTTTTTAATCAACAACAATGGCGATCAGGTTAAAGTAGAGACCTTGAAGCAAAAGAAACTCGGTTTGTATTTTTCAGCATCGTGGTGTCCTCCATGCCAAAGATTCACCCCAGCTTTGGTGGAGGTGTACAATGAACTCGCCCCCAAAGGTGACTTCGAAGTAGTGTTTATCTCTGCTGATGAAGATGATGCCACTTTTATGGAGTACTTCTCTCAGATGCCATGGCTTGCTATTCCGTTTTCCGATTCGGAGGCACGCAACCGCCTTGATGAACTATTCGAGGTGGAAGGGATTCCTAATCTTGTGTTACTTGATGAAACTGGAGAGGTTGTTACTGATAGCGGAGTTGATGTTATTCGTGAATATGGAGTTGAAGGCTACCCTTTTACATTAGCAAAGATTCAAGAATTGAAGGATCTTGAAGAGGAAGCTAAGAGGAACCAATCCTTGAAATCTCTCTTGCTATCTCCTTCTCGTGACTTTGTCATTTCTTCCCATGGGAATCAAATAGCTGTTTCTGAACTCGAGGGCAAGATGGTTGGCCTTTATTTCTCATCGAGTTCATACGAAAGATGCACTGAATTTACTTCCCGCCTTGTGGAGTTTTATGACAAGTTAAAGACAGATGGGGAGAGCTTTGAGATTGTGATGATACCTCTTGATGAGGATGAAGAATCCTTTAAGAAAGGATTGGAAAGTATGCCTTGGTTGTCATTGCCTTTTGAGGACAAGAACTGTGGAAAGTTGATAAGATACTTTGAGGTCTTAACTCTCCCCCGTTTGGTAATTATTGATGAAAATGGGAAAACTCTTCATTCTAATGTTGTTGAGGCTGTTGAGGAACACGGAGCTATTGCATACCCTTTCTCCCCTGAAAAGTTTGCTGAGCTAAGTGAGATCGAGAAGGCCAAGGCTGCATCACAAACCCTCGAGTCCTTGTTGGTCTCTGGAGATCAAGATTTTCTCATTCGAAAAGATGGTACCAAGGTTCTAGTGTCAGAATTAGTGGGAAAGAACATCCTCCTCTACTTTTCAGGAGGGTGGTGTGCTGCATGCCATGTATTCCATCCAAAACTAATAGAAGCATATCATGAGATTAAGGAAAAGGAGGAGGAATTCGAAGTGATTTTCATCTCAAGCGACCACGACCAAGCATCATTTGAAGAATCCTTTGCAGTGATGCCATGGCTGGCTATCCCTTATGGGGATCCAAGGAAGTCATACCTCACCCGGAAGTTCAGGGTGTATGAAGTCCCCATGCTTGTTGCAATTGGAGCAAACGGGCAAACCATCACAAAAGACGCGAGATTTCTGATAAACTATCATGGGGCACGGACTTATCCTTTCACGGAGGAGAGGATCAAAGAGGTTCAGGAAGAAGAGGATGAGGCTGCAAAGGGGTGGCCGGAGAAGCTGGACCATGAGAAACACAAGCATGAGATTTCATTGACCGTCCGTATGATTTATTATTGTGATGTTTGTGATGATGAGGGGCGTAAATGGTCTTATTGCTGTGAAAAGTGTGACTTTGATATGCATCCAAAATGTGCATTAATGGCTGAGTAG 1632 0.4369 MADSEDDAPDEFQDLFSSPDRDFLINNNGDQVKVETLKQKKLGLYFSASWCPPCQRFTPALVEVYNELAPKGDFEVVFISADEDDATFMEYFSQMPWLAIPFSDSEARNRLDELFEVEGIPNLVLLDETGEVVTDSGVDVIREYGVEGYPFTLAKIQELKDLEEEAKRNQSLKSLLLSPSRDFVISSHGNQIAVSELEGKMVGLYFSSSSYERCTEFTSRLVEFYDKLKTDGESFEIVMIPLDEDEESFKKGLESMPWLSLPFEDKNCGKLIRYFEVLTLPRLVIIDENGKTLHSNVVEAVEEHGAIAYPFSPEKFAELSEIEKAKAASQTLESLLVSGDQDFLIRKDGTKVLVSELVGKNILLYFSGGWCAACHVFHPKLIEAYHEIKEKEEEFEVIFISSDHDQASFEESFAVMPWLAIPYGDPRKSYLTRKFRVYEVPMLVAIGANGQTITKDARFLINYHGARTYPFTEERIKEVQEEEDEAAKGWPEKLDHEKHKHEISLTVRMIYYCDVCDDEGRKWSYCCEKCDFDMHPKCALMAE* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3682 543 Pfam Thioredoxin-like 199 291 IPR012336 -
Ahy13g3682 543 Pfam Thioredoxin-like 40 132 IPR012336 -
Ahy13g3682 543 Pfam Thioredoxin-like 360 451 IPR012336 -
Ahy13g3682 543 ProSiteProfiles Thioredoxin domain profile. 12 161 IPR013766 -
Ahy13g3682 543 Pfam C1 domain 498 539 IPR004146 -
Ahy13g3682 543 SUPERFAMILY Thioredoxin-like 185 294 IPR036249 -
Ahy13g3682 543 PANTHER NUCLEOREDOXIN 1-2-RELATED 4 540 - -
Ahy13g3682 543 PANTHER THIOREDOXIN 4 540 - -
Ahy13g3682 543 CDD TryX_like_TryX_NRX 22 151 IPR045870 GO:0004791
Ahy13g3682 543 SUPERFAMILY Thioredoxin-like 345 478 IPR036249 -
Ahy13g3682 543 ProSitePatterns Thioredoxin family active site. 363 381 IPR017937 -
Ahy13g3682 543 SUPERFAMILY Thioredoxin-like 24 142 IPR036249 -
Ahy13g3682 543 ProSiteProfiles Thioredoxin domain profile. 321 481 IPR013766 -
Ahy13g3682 543 Gene3D Glutaredoxin 333 472 - -
Ahy13g3682 543 Gene3D Glutaredoxin 171 312 - -
Ahy13g3682 543 Gene3D Glutaredoxin 15 152 - -
Ahy13g3682 543 SUPERFAMILY Cysteine-rich domain 489 541 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3682 Ahy-Chr13 135509666 135512069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3682 K17609 - gmx:100809224 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3682 13 135509666 135512069 Ahy13g3682 13 135509666 135512069 ECH