Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3667 ATGGGAGTAGTAGTAGCATTATCACCATCACCATCACCACTTTCAGGGGGAAACCTTTTCTCCTCACTCCCCTCCACACCACCACCGACGCCCCCTCACCCTTCTTCCACCCCCCAACCACCAATCCCCATCCCCAAATATCCCCCTCCCCGCAAATCCCTCCAAAACCCTCCCAACAACCACCCCGCCCTCAAACACCACCATCGCTCCAGCTACCACAAGCCAGTCAGCCGCCCCGGCGTCATTGCCTCCGACGGCGACCGCTCCGTCGTCGTCGGCGACTCCGGCGTATCCTACCTCCTCCCCGGAGCTCCCTTCGAGTTCCAATTCAGCTACTCCGAGACCCCGACGGAGAAGCCCATCGCCATCAGGGAGCCGGCGTTCCTGCCATTCGCCCCGCCCACGATGCCGCGGCCGTGGACGGGGAAGGCCCCGCTGAAGAGCAAGAAGGACAAGGAGAAGAAGGTGAGGCTGCTGGAGTCATTGAACCCGCCGCGTCCCGATACCAATGGGGTGAAGCAGTTGGAGATGGCGAAGCCATTGAAGCTTGGTAAATACTCCAGGGATGGGAAGACGAGGGAGGAGATACTCGGCGACCCCTTGAGGAAATGGGAGATAAGGATGCTTGTTAAGCCTATGGTCTCTGATAATCGCCAGGTTAATCTCGGAAGGGATGGATTAACACATAACATGTTGGAGTTGATACATTCGCATTGGAAGCGTAGCCCTGTCTGTAAAATTCGTTGTAAAGGGGTTCCAACTGTAGATATGAAAAATGTCTGTCACCACATTGAGGATAAAACAGGGGGGAAAATAATTCTTAGAGTTGGTGGTGTTGTTTATCTTTTCCGTGGAAGAAACTACAACTATAGTACACGCCCACTGTATCCAGTGATGCTCTGGAAGCCTGCTGCACCTGTTTACCCAAAACTTATACAAGCTGCTCCAGGAGGATTAACAAAATCTGAAGCTGATGAACTACGTCTGAAAGGGAAAAGTCTTTTGCCAATATGTAAATTAGCCAAAAATGGAGTCTACACCTCGCTTGTAAAGGATGTCAGAGAGGCTTTTGAAGGAAGCCCTTTGGCGAAGATTGACTGCAAGGGACTGGAGCCTAGCGACTACAAGAAATTAGGTGCCAAGCTTAAGGATTTGGTTCCTTGTGTTCTGCTGTCTTTTGATGATGAACAGATATTGATGTGGAGAGGCAAAGATTGGAAATCAATGTTCCCACAACCTCCTCCACTTTCTCGTCCTTCAGAAGCTGGCATTACAGGGAATTCGGACAGTACAGGGGAGACAGAAGATGATAATCAATCTGAACAAGAGGGCAACGTGGTGAACACAAGCCCAAAAATGTTGTCTCTGTGGAAGTGTGCAATCGAGTCGAGCAAAGCTTTGTTGCTGGATGAGTTCAATCTTGGTCCTGATGCCCTCTTGGAGAAGGTAGAAGAATTCGAAGGGGTTTCGCAGGCCATGGAGCACTCCTATCCAGCATTGATTTTATCTAATGAGAATGATGCTAAAGGTTCAATTGCAAGCTTTGAAGATGACATAGACAGCTATTCCAGTCAGGATGGCTTGGCTACTGAAGACGAAGGCGATGACGACAATGATGATGATTTCCTTGAAGATGACTTGTTTGATGTTGTGGACTCATCTGCGGAACCCGGATCATTACCTATTGATTTTGTTGTCAACAAGCTGAAACCAAAACTAGAAGAATAA 1728 0.4948 MGVVVALSPSPSPLSGGNLFSSLPSTPPPTPPHPSSTPQPPIPIPKYPPPRKSLQNPPNNHPALKHHHRSSYHKPVSRPGVIASDGDRSVVVGDSGVSYLLPGAPFEFQFSYSETPTEKPIAIREPAFLPFAPPTMPRPWTGKAPLKSKKDKEKKVRLLESLNPPRPDTNGVKQLEMAKPLKLGKYSRDGKTREEILGDPLRKWEIRMLVKPMVSDNRQVNLGRDGLTHNMLELIHSHWKRSPVCKIRCKGVPTVDMKNVCHHIEDKTGGKIILRVGGVVYLFRGRNYNYSTRPLYPVMLWKPAAPVYPKLIQAAPGGLTKSEADELRLKGKSLLPICKLAKNGVYTSLVKDVREAFEGSPLAKIDCKGLEPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKDWKSMFPQPPPLSRPSEAGITGNSDSTGETEDDNQSEQEGNVVNTSPKMLSLWKCAIESSKALLLDEFNLGPDALLEKVEEFEGVSQAMEHSYPALILSNENDAKGSIASFEDDIDSYSSQDGLATEDEGDDDNDDDFLEDDLFDVVDSSAEPGSLPIDFVVNKLKPKLEE* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3667 575 Gene3D - 201 294 IPR035920 -
Ahy13g3667 575 ProSiteProfiles CRM domain profile. 317 413 IPR001890 GO:0003723
Ahy13g3667 575 SMART CRS1_YhbY_2 201 284 IPR001890 GO:0003723
Ahy13g3667 575 SMART CRS1_YhbY_2 319 402 IPR001890 GO:0003723
Ahy13g3667 575 Pfam CRS1 / YhbY (CRM) domain 319 402 IPR001890 GO:0003723
Ahy13g3667 575 Pfam CRS1 / YhbY (CRM) domain 204 284 IPR001890 GO:0003723
Ahy13g3667 575 ProSiteProfiles CRM domain profile. 199 295 IPR001890 GO:0003723
Ahy13g3667 575 MobiDBLite consensus disorder prediction 1 87 - -
Ahy13g3667 575 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 14 570 IPR044599 GO:0000373
Ahy13g3667 575 MobiDBLite consensus disorder prediction 410 447 - -
Ahy13g3667 575 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 14 570 - -
Ahy13g3667 575 MobiDBLite consensus disorder prediction 24 56 - -
Ahy13g3667 575 MobiDBLite consensus disorder prediction 529 543 - -
Ahy13g3667 575 MobiDBLite consensus disorder prediction 133 153 - -
Ahy13g3667 575 MobiDBLite consensus disorder prediction 512 543 - -
Ahy13g3667 575 SUPERFAMILY YhbY-like 200 293 IPR035920 -
Ahy13g3667 575 SUPERFAMILY YhbY-like 319 409 IPR035920 -
Ahy13g3667 575 Gene3D - 319 413 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3667 Ahy-Chr13 135383982 135388089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3667 - - adu:107481137 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3667 13 135383982 135388089 Ahy13g3667 13 135383982 135388089 ECH