Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3099 ATGGCCGGTTATCATGTGAGTCCTGTGATTTTTAGAACCTTGGATATAATGAATCTTCAAAGATTGGCTCCGCCTGAGAATCTTTCAAGGATGAACAACTTGAGAATTGGTGACAGACCACTCTGGTTTAGACCCTTCACCATAGTTAAAGTTGGGGAACAAAACTTTGGCTCAGGCTTGGTTAAGGATGACACACTTGCTGAGAAGAAAAGGGAGCTTTACCAGGCAGTGGAAGGAATCAACAGGGGAATTTTTGGACTCCCATCTGCCAAGAAATTTGAAATTGAGAGTTTGGTGCAGCAGCTAGAATCTCAGAATCCAACTCCAGAGCCAACTCTAGAACTAGACAAGGTGGCTGGGTGCTGGAGGCTTGTTTATAGCACAATCACAATTCTGGGATCAAAGAGAACCAAGTTAGGCCTCAGAGACTTTATCTCATTGGATGAGTTTTTTCAAACCATTGACATAGCCAAGAGCAAAGCAGTTAACGTGGTCGAGTTCAGTGCAAAGGGGTTGAGTTTGTTGTCAGGACAGCTTAGTATTGAGGCTTCTTTCAAGATTGCTTCAGCAACAAGGGTTGACATCAACTTTGCAAGCTCCACCATTACTCCTGATCAGTTGATGCATGTATTCCGGAAAAACTATAATCTTCTGTTGGGCATCTTCAATCCAGAGGGATGA 681 0.4332 MAGYHVSPVIFRTLDIMNLQRLAPPENLSRMNNLRIGDRPLWFRPFTIVKVGEQNFGSGLVKDDTLAEKKRELYQAVEGINRGIFGLPSAKKFEIESLVQQLESQNPTPEPTLELDKVAGCWRLVYSTITILGSKRTKLGLRDFISLDEFFQTIDIAKSKAVNVVEFSAKGLSLLSGQLSIEASFKIASATRVDINFASSTITPDQLMHVFRKNYNLLLGIFNPEG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3099 226 PANTHER FIBRILLIN-5, CHLOROPLASTIC 7 226 - -
Ahy13g3099 226 PANTHER - 7 226 IPR039633 -
Ahy13g3099 226 Pfam PAP_fibrillin 69 209 IPR006843 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3099 Ahy-Chr13 124872474 124874737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3099 70 207 Acyl Lipid Metabolism Gene Families AT4G22240 36.232 1.07e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3099 - - ahf:112791175 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3099 13 124872474 124874737 Ahy13g3099 13 124872474 124874737 ECH
Ahy13g3099 13 124872474 124874737 Ahy3g2773 3 121758808 121760990 hybridization