Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3079 ATGAGTGTGTTGAATAGGAGCATTTCATTGAACAGGAATGGATCATTCAATCGAAGGGGCTTCAGTGTTGGCCTTGGAAGCCCCAAGGTCGCCAATCACGTTCGATTTGGATGGGTCTCTTTGAGAATTCAGGTTCTTGTTATCATTGCCTCTGTCATTTCCTTCTTTGTAGCAATTGGTTGTGGCTACATTTATGTGCTTCCTAGCGTTAGCCATGCTCTCTTAAATGCCCAAGGTCTCTTATCTGACCACAACGATAACGAATTACTCACAAGCTGTGATGTCTTTGATGGAAGCTGGGTTCAGGTCCAAGGGTACCCTTTATACAATGCCACTGAGTGTCCCTTTGTGGAAAAAGGATTCAATTGTTTGGGGAATGGAAGGGTTGACACGGATTATCTCAGCTGGCGGTGGAAACCAAAGGGTTGTAACATTCCAACGTTTGATGTGCGTAGCGTTTTGGAAATGCTGAGGAGCAAAAGGGTTGTTTTTGTTGGTGATTCAATGAGTAGAACACAGTGGGAGTCTATGATTTGTATGCTTATGGCTGGTGTTGAGGATAAGAGTGGTGTTTATGAAGTCAATCAAAATAACATAACAAAGCGAATTAGGTTCTTGGGGGTTAGGTTCAGTGCCTTCAACTTCACCATTGAGTTTTTCCGGTCGGTTTTTCTTGTGCAGCAGGGTAATTTGCCCAGATATATGCAAAGGCCAAGGAGGGTGAAATCCACACTTATGCTGGACAAGTTAGATGATATAAGTGACCAGTGGGTTAATTCAGATGTTCTGATATTCAACACTGGCCATTGGTGGGTGCCATCTAAGCTTTTTGACATTGATCAAACCTTCAGGCAGTGCAATGTGACTAAGTACCCTACCCCAGAAACTGAGGGAAGGGACCAGAGCTTGTTTTTGGACACGGTTTTGGAAGTGGTTAAGAATATCAGAGTTCCTATAAATGTTCTCCGCGTTACTTCTATGTCATCTTTCCGGAGCGATGGACATGTTGGTAATTGGAGTGATAATCCATTCATTCAAGATTGTAGTCACTGGTGTCTGCCAGGAGTACCTGATATGTGGAATGAAATTGTCCTGTCCCAACTCTTTTCCGACAATGAAACCCCTTATCGGCAAATGGAAATTGCAGAATAA 1152 0.4323 MSVLNRSISLNRNGSFNRRGFSVGLGSPKVANHVRFGWVSLRIQVLVIIASVISFFVAIGCGYIYVLPSVSHALLNAQGLLSDHNDNELLTSCDVFDGSWVQVQGYPLYNATECPFVEKGFNCLGNGRVDTDYLSWRWKPKGCNIPTFDVRSVLEMLRSKRVVFVGDSMSRTQWESMICMLMAGVEDKSGVYEVNQNNITKRIRFLGVRFSAFNFTIEFFRSVFLVQQGNLPRYMQRPRRVKSTLMLDKLDDISDQWVNSDVLIFNTGHWWVPSKLFDIDQTFRQCNVTKYPTPETEGRDQSLFLDTVLEVVKNIRVPINVLRVTSMSSFRSDGHVGNWSDNPFIQDCSHWCLPGVPDMWNEIVLSQLFSDNETPYRQMEIAE* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3079 383 Pfam PMR5 N terminal Domain 92 144 IPR025846 -
Ahy13g3079 383 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 145 287 IPR026057 GO:0016740
Ahy13g3079 383 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 280 370 IPR029962 GO:0016413
Ahy13g3079 383 PANTHER PROTEIN TRICHOME BEREFRINGENCE-LIKE 7 34 281 IPR029964 -
Ahy13g3079 383 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 34 281 IPR029962 GO:0016413
Ahy13g3079 383 PANTHER PROTEIN TRICHOME BEREFRINGENCE-LIKE 7 280 370 IPR029964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3079 Ahy-Chr13 123669142 123672331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3079 - - adu:107480267 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3079 13 123669142 123672331 Ahy13g3079 13 123669142 123672331 ECH
Ahy13g3079 13 123669142 123672331 Ahy3g2748 3 120847042 120850157 hybridization