Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3053 ATGTCCATAAGCATCCACAATCTTCCTCGCTCTTCTGTCATATATGCCTCTGATTTAGGTATTCTGAGAATCAGAGTTTCTGGAAATAGATTATTCCGCAAGAATGGAAATAAGTGTTCGGGAGCGGGATCTATATCGTGTTCGGCTGGCGCTAGGAATGATGATTTTCTTCCTTCCATTAATCAATTAAGCGATGCACGCCTCATTTATTCCGTTGCTTCATCCATGGGCCATAACCAGGAGTCTCATCCAGAATCACATTTTAGAGTTCCTGCAATTGTCGATGCCCTACAAGAAATGCACCTCACTTCAAAGTTTCGTGGCTCTGAGGTAATTGAACTTCAAAATTTCGAGCCAGCTTCAGTAGATGACATTGCAAGTGTGCATGCAAGAGCTTATGTTTCTGGCCTTGAAAAGGCTATGGATCAAGCATCCGAGAAGGGTCTAATTTTCATTGATAGTTCTGGACCAACCTATGCTACTGCTACTACCTACCGGGAGTCAATTGTTGCTGCTGGTGCTGGATTAGCCTTAGTTGACTCAGTGGTTGCAGCTTCAAAGATAAGTAGAGATCCACCTACTGGTTTTGCTTTGATAAGACCACCGGGACACCATGCTGTTCCACAAGGACCAATGGGCTTCTGTGTTTTTGGAAATGTGGCCATTGCAGCTCGTTATGCCCAGCGTGTTCATGGACTAAAGCGCGTCTTCATAATTGACTTTGATGTTCACCATGGAAATGGAACAAATGATGCTTTCTATGATGATCCAGATATATTTTTCCTTTCAATTCATCAAGATGGAAGCTACCCAGGTACTGGTAAATTTGACGAAGTTGGCAGCGGAGCTGGTGAAGGAACCACTCTAAATTTGCCTCTTCCTGGAGGATCAGGTGATACTACTATGAGAACAGTGTTTGATGAAGTCATTGTACCTTGTGCTCAAAGATTTAAGCCAGATATAATCCTTGTTTCTGCTGGATATGACGGGCACGTATTGGATCCACTAGCCAACCTTCAATACACAACTGGAACATATTACACGCTTGCTTCCAACATTAAACAACTATCAAAAGAGTTATGTGGAGGCAGATGCGTGTTCTTCTTAGAAGGAGGATACAACTTAAAGTCTCTTTCATACTCAGTGGCAGACACATTCCGTGCTCTTCTCGGTGACCCAAGCTTGGCATCGGAGTTTGATGACCCCAATATTTTATATGAAGAGCCATCAACAAAGGTTAAGCAAGCTATTCAGAGGATTAAATCCATTCATTCCCTGTGA 1281 0.4286 MSISIHNLPRSSVIYASDLGILRIRVSGNRLFRKNGNKCSGAGSISCSAGARNDDFLPSINQLSDARLIYSVASSMGHNQESHPESHFRVPAIVDALQEMHLTSKFRGSEVIELQNFEPASVDDIASVHARAYVSGLEKAMDQASEKGLIFIDSSGPTYATATTYRESIVAAGAGLALVDSVVAASKISRDPPTGFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSIHQDGSYPGTGKFDEVGSGAGEGTTLNLPLPGGSGDTTMRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYTLASNIKQLSKELCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDPSLASEFDDPNILYEEPSTKVKQAIQRIKSIHSL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3053 426 PANTHER HISTONE DEACETYLASE 14 39 425 - -
Ahy13g3053 426 CDD HDAC_classII 83 390 - -
Ahy13g3053 426 PRINTS Histone deacetylase superfamily signature 319 329 IPR000286 -
Ahy13g3053 426 PRINTS Histone deacetylase superfamily signature 201 224 IPR000286 -
Ahy13g3053 426 PRINTS Histone deacetylase superfamily signature 235 250 IPR000286 -
Ahy13g3053 426 SUPERFAMILY Arginase/deacetylase 78 394 IPR023696 -
Ahy13g3053 426 Gene3D Histone deacetylase domain 58 425 IPR037138 -
Ahy13g3053 426 Pfam Histone deacetylase domain 83 388 IPR023801 -
Ahy13g3053 426 PANTHER HISTONE DEACETYLASE 39 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3053 Ahy-Chr13 122787538 122791606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3053 - - gmx:100788664 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3053 13 122787538 122791606 Ahy13g3053 13 122787538 122791606 ECH
Ahy13g3053 13 122787538 122791606 Ahy3g2720 3 120047481 120051718 hybridization