Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3044 ATGGAATCAGCAACGCCAACCCTCGGACACGCTCAGCCACCCAAGGTTCTAAAAGACGAAAATGGAGCTCTTATTTTCGACTCAACCATGATGCGAAATGCGTCGGAAATCCCCAAAGAATTCCTCTGGCCATCTAACGATTTAATTATCACTGCAGACGAGGAGCTCAACGAGCCTCTCGTCGACTTGGCAGTCCTCAAGAGCGAGGACCACGAAGCCATAGCTCACGCAGCCCAGCTCGTGAGGGAGGCTTGTGTCAAGCACGGTTTCTTCCAAGTAACTAACCATGGCGTCGATCAGGAGTTAATCGATGCCGCTTACCAAGAGGTTGACACCATATTTGGGCTTCCTCTGGAGCGGAAATTAGCTGCTCGAAGGCAGCCCGGTGCTGTGTCCGGCTACTCCGGAGCACATGCAGATCGATATTCAAGCAAGTTGCCATGGAAGGAGTGCTTCTCTTTCAAATATGCTCACATCGATCCCTCTCACTCGCAGATTCTTCACTACTTCATTTCTCTCTTCGGTCAGGATCTTCGTAGCTCTGGGATCGTGTATCAGAAATACTGTGACGCAATGAAGGAGTTGTCTTTTGCAATCATGGAGCTTTTGGCCATTAGTCTTGGCCTTGATCGTTTGTATTTTAAGACATTTTTTGAAGATGGTGAGTCAATAATGAGATGCAACTCTTACCCTCCTTGCAACAACTCAAGCCTCACACTTGGGACTGGTCCGCACAGTGATCCAACTTCATTGACTGTTCTTCATCAAGACCAAGTTGGTGGCTTAGAAGTTTATCTTGACAACAAATGGTTTGCTGTTCGACCAAGACTTGATGCATTTGTCATTAATATTGGTGACACTTTTATGGCATTGTCAAATGGGAAATACAAGAGTTGTCTACACAGGGCATTGGTAAACAGAGAGGTGGAGAGGAAGTCATTGGTTTATTTTGTGAACCCAAAAGAAGACAAAACAGTGAAACCAACAAAAAAGCTATGTAGCAGCGATGAAGAAAGGAAGTACCCAGATTTCACATGGTCTGATTTGTATGAATTCACACAAAAACATTATAGAGCTGATGTCTCGACTCTCCAAGGTTTCATCCCATGGTTCATTGCTGGCAAGCCTTCTAATTACTAG 1140 0.4535 MESATPTLGHAQPPKVLKDENGALIFDSTMMRNASEIPKEFLWPSNDLIITADEELNEPLVDLAVLKSEDHEAIAHAAQLVREACVKHGFFQVTNHGVDQELIDAAYQEVDTIFGLPLERKLAARRQPGAVSGYSGAHADRYSSKLPWKECFSFKYAHIDPSHSQILHYFISLFGQDLRSSGIVYQKYCDAMKELSFAIMELLAISLGLDRLYFKTFFEDGESIMRCNSYPPCNNSSLTLGTGPHSDPTSLTVLHQDQVGGLEVYLDNKWFAVRPRLDAFVINIGDTFMALSNGKYKSCLHRALVNREVERKSLVYFVNPKEDKTVKPTKKLCSSDEERKYPDFTWSDLYEFTQKHYRADVSTLQGFIPWFIAGKPSNY* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3044 379 PRINTS Isopenicillin N synthase signature 280 306 - -
Ahy13g3044 379 PRINTS Isopenicillin N synthase signature 81 98 - -
Ahy13g3044 379 PRINTS Isopenicillin N synthase signature 245 266 - -
Ahy13g3044 379 SUPERFAMILY Clavaminate synthase-like 28 360 - -
Ahy13g3044 379 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 374 - -
Ahy13g3044 379 Pfam 2OG-Fe(II) oxygenase superfamily 222 320 IPR044861 -
Ahy13g3044 379 Gene3D - 27 358 IPR027443 -
Ahy13g3044 379 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 220 320 IPR005123 -
Ahy13g3044 379 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 17 374 - -
Ahy13g3044 379 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 158 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3044 Ahy-Chr13 122485314 122488074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3044 35 358 Glycosyltransferase AT5G59530 29.942 3.28e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3044 K05282 - gmx:100816834 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3044 13 122485314 122488074 Ahy13g3044 13 122485314 122488074 ECH