Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3040 ATGGCAACGACGACGCTGTTCACCCTCCATCTCTGTCGTTTTGGCCAAAGCTTCTCCAAAAAACTATTCTCTACGTCCCCTTCTTCTGACACTCTTCTGAACCCTCACCACGTCACGTTCCACCACAAATTACGCCGCCCAAACTCCTCCTCTGTCCCCGCTTTCTTCCGGCGCTTCTCAGCTGTCGCAGCTGCTTCCACTTCCGGAGAGGCGAATTACGATGGAATTGGAACAGCTGATGAAAAATATGATGTGATTGTGGTTGGAGGAGGGCACGCAGGTTGTGAAGCCGCACTTGCCTCTGCGCGTTTGGGTGCAAGAACTCTTCTTCTTACTCTCAACATTGACCGTATTGCCTGGCAGCCTTGCAATCCAGCTGTTGGTGGACCTGCGAAGTCTCAATTGGTTCACGAAGTGGATGCGCTAGGTGGTGAAATAGGGAAGATTGCTGACAGATGTTACTTGCAGAAGCGGGTGCTTAATGTATCCAGAGGACCTGCAGTTCGTGCATTACGTGCTCAAACTGATAAAAGGGAATATGCCATGCAAATGAAAAGTGTAGTAGAAAGCACACCAAACCTTTCAATCAGAGAGGCTATGGTCACAGATATATTACTTGGGAAAAATGATAATGTGGAAGGTGTTTGTACATTTTTTGGGATGAAATTCTATGCTCCATCTGTTGTTCTCACAACAGGAACTTTTATGAGTGGCAAAATCTGGGTTGGTAGAACTTCCATGCCTGCAGGAAGAGCTGGCGAGTCTGCTTCTCATGGATTAACTGAGAACTTACAGCGTCTTGGTTTTGAAACTGATCGGCTGAAAACCGGAACCCCTGCCCGAGTGGACATTCGTACTGTAGATTTCTCAGGTTTAGAGCCTCAGCATGGAGACAAAGAGGTCAGCTGGTTTAGTTTTGATCCTGATGTCCATATTGAAAGAGAACAGATGTGCTGCTACCTAACCCGTACTACAGGTAGAACTCACCAGATAATAAGAGATAACTTACATGAAACACCAACTTATGGAGGATGGGTTGAAGCTAAAGGACCAAGATATTGTCCTTCCATTGAAGATAAGATTGTAAGGTTCCAAGATAAAGAGTCTCATCAAATATTTCTTGAACCAGAGGGTCGCAGTGTGCCTGAGCTCTATGTGCAGGGGTTCTCAACAGGTTTGCCAGAGAGATTACAACTACCTTTGCTCAGAACTTTGCCTGGACTTGAGAACTGTTCAATGTTGAGGCCTGCATATGCTGTAGAGTATGATTATTTACCTGCTCATCAATGTGCTAGGTCTCTTATGACAAAGAAAATACAAGGATTATTCTTCTCTGGTCAGATAAATGGAACTACTGGCTATGAGGAAGCTGCAGCACAGGGCATAATTTCTGGCATCAATGCGGCTAGATATGCTGATGGTAAGCAACTCATTGTCCTTGAAAGAGAGAGCAGCTATATAGGAACATTAATTGATGACCTAGTTACCAAGGATCTGCGAGAACCTTATCGCATGTTAACAAGCCGCTCAGAGCATCGGTTACTCTTGAGATCTGATAATGCTGATAGCCGTCTCACCCCCTTGGCTCATGAAATTGGGTTGATAGATGATAGACGGTGGAAACTGTACCAGGAGAAACAGGCTCGAATTTCTGAGGAAAAGAAGCGATTGAGAAGTGTCAGAATTTCAGGGGGAGACTTGGCTGCTGAAGTTTCTCGAGTCTCCGGTCAGCCAGTGAGGGACTCTTCAACATTGGAAAGTCTTCTTAAGAAACCACACATGCAATATGGAATTCTTGATGAGCATGGCTTTGGTAACATAGAGTTATCTAGAATAGAGAAAGAATGTGTTGAGATCGATATTAAGTACGAAGGTTTCATCTTGCGTCAGCAAAGCCAGCTTCAACAGATGGTTACTCAACAGCATAGACAACTTCCCGAAGACTTGGATTACCATATGATTACAACGTTATCTATTGAAGCACGGGAAAAGCTTTCCAAGGTTAGGCCGCAAACCATTGGTCAGGCAAGCAGAGTTGGTGGAGTGAGCCCTGCTGACATTACTGCTCTACTAATTGTGCTTGAAGCTAATCGGAGGAAAGCTCAGGAACAAAGCAGGTACAAAATAATGAATGCTATGCGAGCAAAAGCCCTGGAGGAGGAGGTGCCTGAAGTTTCTTGCACCGAAACAGTCAGCTCTTGA 2202 0.451 MATTTLFTLHLCRFGQSFSKKLFSTSPSSDTLLNPHHVTFHHKLRRPNSSSVPAFFRRFSAVAAASTSGEANYDGIGTADEKYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKIADRCYLQKRVLNVSRGPAVRALRAQTDKREYAMQMKSVVESTPNLSIREAMVTDILLGKNDNVEGVCTFFGMKFYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHGLTENLQRLGFETDRLKTGTPARVDIRTVDFSGLEPQHGDKEVSWFSFDPDVHIEREQMCCYLTRTTGRTHQIIRDNLHETPTYGGWVEAKGPRYCPSIEDKIVRFQDKESHQIFLEPEGRSVPELYVQGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYDYLPAHQCARSLMTKKIQGLFFSGQINGTTGYEEAAAQGIISGINAARYADGKQLIVLERESSYIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLAHEIGLIDDRRWKLYQEKQARISEEKKRLRSVRISGGDLAAEVSRVSGQPVRDSSTLESLLKKPHMQYGILDEHGFGNIELSRIEKECVEIDIKYEGFILRQQSQLQQMVTQQHRQLPEDLDYHMITTLSIEAREKLSKVRPQTIGQASRVGGVSPADITALLIVLEANRRKAQEQSRYKIMNAMRAKALEEEVPEVSCTETVSS* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3040 733 PRINTS Pyridine nucleotide disulphide reductase class-I signature 228 237 - -
Ahy13g3040 733 PRINTS Pyridine nucleotide disulphide reductase class-I signature 84 106 - -
Ahy13g3040 733 Gene3D - 76 306 IPR036188 -
Ahy13g3040 733 Gene3D - 391 535 IPR036188 -
Ahy13g3040 733 Hamap tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 81 699 IPR004416 GO:0002098
Ahy13g3040 733 PANTHER GLUCOSE INHIBITED DIVISION PROTEIN A 67 701 IPR002218 GO:0008033|GO:0050660
Ahy13g3040 733 Pfam tRNA modifying enzyme MnmG/GidA C-terminal domain 479 691 IPR026904 -
Ahy13g3040 733 ProSitePatterns Glucose inhibited division protein A family signature 1. 350 364 IPR020595 -
Ahy13g3040 733 SUPERFAMILY FAD/NAD(P)-binding domain 81 337 IPR036188 -
Ahy13g3040 733 SMART GIDA_assoc_3_2 621 692 - -
Ahy13g3040 733 Gene3D - 536 625 - -
Ahy13g3040 733 TIGRFAM gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 83 696 IPR004416 GO:0002098
Ahy13g3040 733 Gene3D - 644 695 IPR044920 -
Ahy13g3040 733 Pfam Glucose inhibited division protein A 84 475 IPR040131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3040 Ahy-Chr13 122304314 122311359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3040 K03495 - gmx:100791841 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3040 13 122304314 122311359 Ahy13g3040 13 122304314 122311359 ECH
Ahy13g3040 13 122304314 122311359 Ahy3g2707 3 119672348 119678590 hybridization