Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3034 ATGTCGGTACCTGGTACCATTGATTCAAACTCAAATTCAAGCTTGTTTCTTTCTCTGCCTGATGATGTGTTTGCCATGGTGTCACGCTTCCTCTTGCCCAGAGATGTGTGTAGTCTCAGCTTATGCTGCAGGAGCCTCTATGCTCTTGCAGCCTGTGAGAAAGTGTGGCTTACACAGTGTGACATGGTGGGGATAGTTCCCCATAAAGACCTTGTTGACTGGAGAACCGGTGTCTCATCATACAAGGCGATTTGCCGTTTTCTTCTCAATATTAAACCCTTGATTGGGATATGGGTTCATCAGAATCCTGAGCTTGGGAACCTTGTCTATGTCATGCCTGGTTTCGTGTCGGTTGTTGGGTGTAGGATAATCCCTCAGGAGCTTGGTCCAATGGGGATTCATGATGGTCCAATCCTATGGGCTCCTGTGTTTGAAATTATTGGTGATTTTGATGGTTCACCAACATTTTTTCTTCATGGGAGGGAGAAGGGGTTGGACTATATTTGTCATGGATCATTCAAGTCCATAAACAAATCTTGCAATGTACTATTGCTTGAGGTTGAACCAAGGGAAAAATGTATAGGAAATAGGGAAAATTCTAGGTTACAAGGAGTGGTTGGAAATAATAATAAGGCAATGGTTCCCTTCGGCAGGTTGTCTCTAAGTGATAGGAAAAAGTTGCTTGAGTTCACTACTAGGCATGTTCGGCAATTGGTTCCTAATATGGCAATGGGACCCTTGTTTCCAAGGTTAAGGGATGGCTATGAGAATTTCCAGAAAGAATTGGTGCTGTTGAGGGGAAGAAGGGAGATCCTTAGTCAAATGTACAGGCTCGATCATAGTCAAGTTCATAACATAGAAAATTCTGAGGAGGCTGTTGGTCCTAAGCAATTAGAACAAGATGACAGAAGAAAGAGTATCGAGTGTTCAAGGGCTTTAACTATTCTTCTGGATGGGGAGGGCAGTGATACACAATATAACAAGAGAAAAAATGGTGTAAAATTCTGGGGTAGCCTTAAACAGATGCTAGGAGGGTCTAGCTCAAACAACGGCCGTCATGAGAAGAAGCATGTGCGGCTTGAAGAATTTCTTGGATCAAATGATACAATAATGCTGACATTAAAGGCCTCAACTGTAAAATTATCTGCTTATCGAGCATGGCCAAATATGCCTGAGAGTTGGTTTGCACTTTACAAGATGCCATTGCAAGATCCAACAGAGGACCAAGTTTATGCCGGTTTATGGGGAGGAACTTTTGGTTGGCCTCCTGGAAAACCTTCCGAAGACAAGCCTGGAAAGGCTTTATTCTTTCTTCTGCTCTCTTATGAGGAGTCTCATGGACAACAACTTCTCATTGCAACCAAAATATTGGAAGGCACACATTATGTGTTACATCCAAATGGTTCAGCAATGTTTATAGTGAATATCAACGAGCCTTCATCTGAACCATTTCCTTGGAACTCTGATGCTGACTCCTATCCGATTAATATCAAGCATTCTTTCACGGGTGAGGGTATTGCAAATGGTTATGGATTCAGATACCCTGGATCAAAGCCTGGTTCCCTCTTTGAATTTCAAGACGGTGTCCTTGCCTTCATTTGGAAGGACTCGAGGTCTGTTTTGACGTTGCAGAGACTTAACTTGCAACAGCTTTTGAAGAAGGGAGAAAGGGTGCCTTGTCTGCCTCCCATCACAAATTTTTCATGCTTGACAAAATCCTACTCAAATGTGTTTACTGGATTTCCTGATGCTTACACAAGTTCATCGTCACCAAGGTAG 1779 0.4283 MSVPGTIDSNSNSSLFLSLPDDVFAMVSRFLLPRDVCSLSLCCRSLYALAACEKVWLTQCDMVGIVPHKDLVDWRTGVSSYKAICRFLLNIKPLIGIWVHQNPELGNLVYVMPGFVSVVGCRIIPQELGPMGIHDGPILWAPVFEIIGDFDGSPTFFLHGREKGLDYICHGSFKSINKSCNVLLLEVEPREKCIGNRENSRLQGVVGNNNKAMVPFGRLSLSDRKKLLEFTTRHVRQLVPNMAMGPLFPRLRDGYENFQKELVLLRGRREILSQMYRLDHSQVHNIENSEEAVGPKQLEQDDRRKSIECSRALTILLDGEGSDTQYNKRKNGVKFWGSLKQMLGGSSSNNGRHEKKHVRLEEFLGSNDTIMLTLKASTVKLSAYRAWPNMPESWFALYKMPLQDPTEDQVYAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEESHGQQLLIATKILEGTHYVLHPNGSAMFIVNINEPSSEPFPWNSDADSYPINIKHSFTGEGIANGYGFRYPGSKPGSLFEFQDGVLAFIWKDSRSVLTLQRLNLQQLLKKGERVPCLPPITNFSCLTKSYSNVFTGFPDAYTSSSSPR* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3034 592 SUPERFAMILY F-box domain 7 398 IPR036047 GO:0005515
Ahy13g3034 592 Gene3D - 3 87 - -
Ahy13g3034 592 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Ahy13g3034 592 PANTHER F-BOX PROTEIN FAMILY-LIKE 11 592 IPR040275 -
Ahy13g3034 592 PANTHER F-BOX PROTEIN FAMILY-LIKE 11 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3034 Ahy-Chr13 122150145 122153340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3034 - - adu:107480208 1174.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3034 13 122150145 122153340 Ahy3g2703 3 119551938 119555155 hybridization
Ahy13g3034 13 122150145 122153340 Ahy18g2757 18 131238822 131242987 PCT
Ahy13g3034 13 122150145 122153340 Ahy8g2494 8 47751363 47755511 PCT
Ahy18g2757 18 131238822 131242987 Ahy13g3034 13 122150145 122153340 PCT
Ahy8g2494 8 47751363 47755511 Ahy13g3034 13 122150145 122153340 PCT